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SCNpilot_expt_500_bf_scaffold_3932_6

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 4352..5509

Top 3 Functional Annotations

Value Algorithm Source
Long-chain-fatty-acid--CoA ligase LcfB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D406_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 380.0
  • Bit_score: 566
  • Evalue 1.70e-158
fadD; long-chain fatty acid-CoA ligase similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 381.0
  • Bit_score: 566
  • Evalue 5.40e-159
AMP-dependent synthetase {ECO:0000313|EMBL:KJF70095.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 381.0
  • Bit_score: 566
  • Evalue 2.40e-158

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Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
GTGCTCTATGTCGAGGATATTGCTGAGGCGACGGCACCGGCCAGCGGTGTAACAGAGGCAGGGATCGGCGAGGATCTGGCGGCCATTCTCTACACGTCCGGCTCGACCGGCATGCCAAAGGGCGTGATGCTGTCCCATCGCAACCTGCTGGCCGGCACGCGCATCGTACGCTCCTATCTCGGGATCAGTGGCCAGGATCGCATTCTCTCCATCCTGCCGTTCAGTTTTGACTATGGGCTCAATCAGTTGCTGACCGTGGTAGAGCAGGGGGCGAGCCTCGTGATCTGCACATTCCGCTTCGGCGACGAGATCGTGCGGGCCTTGCGGGACAATGAAATCACCGGCCTGGCCGGGGTGCCCACCATCTGGGCCATTCTCACCCAGGGCGCACCGCTCTTGCGTAAAACTGCGCTGCCGCATTTGCGCTATATCACCAATTCGGGTGGGCGGGTGCCCGAGGCGACGGTCAAGGCACTGCGGGCACTTTTGGGCGAGACGCAGATTTTCCTCATGTACGGGCTGACCGAAGCGTTCCGCTCGACCTTTTTGCCACCTGAGGAAATCGAGCGCCGGCCGACATCTATCGGCAAGGCGATACCGGAATGCGAGGTGTTTGCCGTGACCGAGGATGGGCGCAGAGCAGCGCCGGGCGAGCCGGGCATATTGGTGCATCGCGGACCGACCGTGTCGCTGGGATACTGGCGGCGTCCGGAGGAAACGGCGCGGGTGCTGCGGCCACATCCGTTTCGCGATGCGTTGGAGGGCGGGGAAACTGTCTGCTATTCCGGCGATCTCGTGGTCGAAGACGCGGACGGGTTTTTCAATTTCGTCGGCCGCGGTGACGGAATGATCAAATCCTCCGGCTATCGCATCAGTCCCACCGAGGTCGAAGAGGCATTGATGGCCACCGGCCTGTTCCGCCAAGTCGCGGCAATCGGACTGCCCGACGCCCTGGCGGGGCAAAAGGTGCATGCCGTCGCCGTGCCGCTGTATGAGAGCATCGATGCAATGGCGGTGCTGCGTCAACTCGGCGAGACCATTGCCGGCTATATGGTGCCGCGCGCCCTGGAACTGGTCGATGCCTTGCCGACGACACCCAATGGCAAGGTGGACTATCCGACGCTGGTGCGCGATCGGAGCATCCATGTCCAGTCCTGA
PROTEIN sequence
Length: 386
VLYVEDIAEATAPASGVTEAGIGEDLAAILYTSGSTGMPKGVMLSHRNLLAGTRIVRSYLGISGQDRILSILPFSFDYGLNQLLTVVEQGASLVICTFRFGDEIVRALRDNEITGLAGVPTIWAILTQGAPLLRKTALPHLRYITNSGGRVPEATVKALRALLGETQIFLMYGLTEAFRSTFLPPEEIERRPTSIGKAIPECEVFAVTEDGRRAAPGEPGILVHRGPTVSLGYWRRPEETARVLRPHPFRDALEGGETVCYSGDLVVEDADGFFNFVGRGDGMIKSSGYRISPTEVEEALMATGLFRQVAAIGLPDALAGQKVHAVAVPLYESIDAMAVLRQLGETIAGYMVPRALELVDALPTTPNGKVDYPTLVRDRSIHVQS*