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SCNpilot_expt_500_bf_scaffold_3932_7

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 5496..6788

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000313|EMBL:AHK01527.1}; EC=4.1.1.20 {ECO:0000313|EMBL:AHK01527.1};; TaxID=1435057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens LBA4213 (Ach5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 426.0
  • Bit_score: 539
  • Evalue 3.50e-150
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 426.0
  • Bit_score: 537
  • Evalue 3.00e-150
  • rbh
Diaminopimelate decarboxylase n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HAU5_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 426.0
  • Bit_score: 539
  • Evalue 4.30e-150
  • rbh

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1293
ATGTCCAGTCCTGAAGCCCCCAAGCCACCGCACGGCCCGGATTTGGCCAGGACGCAATTTGCCGTTTCTGGCCCGGATCTGGTCATCGGCGGGTTACGCGTTGCCGAGATTGTCGAGACCGTCGGCTCGCCGGTGTTCATCTATGACGCCGATGCCATGCGGCAGAGTTATCGCGCGCTTGCCGCAGCGCTCGATGGGTTTGCCGCGATCCACTACTCGGTAAAGGCCAATCCGGCGAAAGGAGTGATTTCACTGTTTCTCGCCGAAGGCGCGGGGGTGGAGATCGCGTCGCTGGGCGAATATCGGGCGGCCCGGCTGGCAGGCGCGCGCGCAGAGCAAATCCTCTTTGCCGGCCCGGGAAAACGTCGCGGCGAGCTCGAGGCGGTTATTGGCGAGGGCATAGGCGAAATTCACCTCGAGACCGTAGAGGAAATCGAGCGGGTGTCCGAGATCGCCACGCGGCTTGGACGATTGGTGCGGGTTTCGTTACGGATCAATCCCGTTGCGGCGGCACAGGCCGGGGCCATGCGCATGGGCGGCAAGCCCACGGCCTTCGGCTTTTGCGAGGAGGATATCGACGGCGTGCTCGACCTTGTGCGACATGCTCCAGGGATCGCGCTGGTCGGCATTCATGTCTATGGCGGCACGCAGATCCTGGAGGCAGCCGCACTGCTGAACCAGTGGCAGCATGGCATTCGCATCGCTGGTGACATCGCCGAAAAGTGGGGCGGGCCGCTGGAAACGATTGATTTGGGCGGGGGCCTGGGCATTCCTTACTACGCCGGGGAAGCGCCGCTGGACCTGAATGCGGTCGCTGCCGGACTGCCGCAGTTGTCCAGCCAGCTTCGATCGCATCCGCTGCTGCAGGCCGCCAATGTAATCGTCGAGCCGGGCCGGTTTCTGGCCGGGCCGGGTGGGGCCTATGTGGCCGAGATCAACGCGGTAAAGCATTCTCGCGGGACGCGCTTCGTCATCACTGATGGCGGCATGCATCACCATTTGGCTGCCTCCGGCAATCTCGGGCAGATCATCAAGCGGGATTTTCCGGTTGTTGCGGCCAGTCGCATGGACGAGGGTGCTCTTTACCCGGCCACGGTCGTTGGTCCGCTGTGCACGCCGCTCGATACGCTGGCGCGCGAAGCACTGCTTCCCGAACTCAAGGCAGGCGATCTGATTGCGGTACTGCAGTCGGGTGCCTATGGCGCGACGGCGAGCCCGTCTGGCTTTCTCAGCCACCCAGCGGCCGCGGAGGTTATTGTCGAGGCCGGGACCATGCGATCGGCACAGCTGTGA
PROTEIN sequence
Length: 431
MSSPEAPKPPHGPDLARTQFAVSGPDLVIGGLRVAEIVETVGSPVFIYDADAMRQSYRALAAALDGFAAIHYSVKANPAKGVISLFLAEGAGVEIASLGEYRAARLAGARAEQILFAGPGKRRGELEAVIGEGIGEIHLETVEEIERVSEIATRLGRLVRVSLRINPVAAAQAGAMRMGGKPTAFGFCEEDIDGVLDLVRHAPGIALVGIHVYGGTQILEAAALLNQWQHGIRIAGDIAEKWGGPLETIDLGGGLGIPYYAGEAPLDLNAVAAGLPQLSSQLRSHPLLQAANVIVEPGRFLAGPGGAYVAEINAVKHSRGTRFVITDGGMHHHLAASGNLGQIIKRDFPVVAASRMDEGALYPATVVGPLCTPLDTLAREALLPELKAGDLIAVLQSGAYGATASPSGFLSHPAAAEVIVEAGTMRSAQL*