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SCNpilot_expt_500_bf_scaffold_4520_13

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(11308..12009)

Top 3 Functional Annotations

Value Algorithm Source
Protein rarD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RG12_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 217.0
  • Bit_score: 255
  • Evalue 3.90e-65
Uncharacterized protein {ECO:0000313|EMBL:KFL29015.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 221.0
  • Bit_score: 336
  • Evalue 3.20e-89
protein rarD; K05786 chloramphenicol-sensitive protein RarD similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 217.0
  • Bit_score: 255
  • Evalue 1.20e-65

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGGGCGTCATCGCCATTTCGGCGGCACTGCTGGCGGGCAATTGGCTGCTCTATGTCTGGGCAGTGGAGGTGGGTGAGGTGCTGCAGGCCAGCTTCGGCTATTTCATCAATCCGCTGGTCAATATCGCCATCGGCATGGTGTTGCTGGGCGAGCGGCAGAACCGGCTGCAGACCATTGCCATCGCCATTGCTGTCGTCGCCATTCTGCTGCAAGCGGTTGGCCTGGGCGGCGTGCCCTATATCGCGCTGGGCCTGGCAGTGTCCTTCGGCTTCTATGGCTTTATTCGCAAGACCGCCAAGACCGGTCCGGCCACCGGACTTTTCGTCGAAACCCTGGTGGTGGCGCCTTTCGCTCTGGCGTTCGTGGTCTTTACCTTTGCCACCAGCGGGCCGGGCGTGCATGCCGATCCCGGCATGATGGCACTGTTTATGCTCACCGGACCGGCGACTGCCGTGCCGCTTCTGCTCTTTGCCTATGGGGTGCGCAGGCTGCGCCTCACCACCATCGGCATGCTGCAATATCTGGCGCCGTCCATCCAGTTCCTGCTCGCCATCTTCATGTTCGGCGAGCATCTCAACACGGTGCGCCTGGTAAGCTTTGCGCTGATCTGGCTGTCACTGGCGGTGTTCAGCTATGACAGCTTCCGTCAGCGCAGCCGGGCGCGTGCCGCGGATCACGTCGGCGATCTGGTTGAAGGTTGA
PROTEIN sequence
Length: 234
MGVIAISAALLAGNWLLYVWAVEVGEVLQASFGYFINPLVNIAIGMVLLGERQNRLQTIAIAIAVVAILLQAVGLGGVPYIALGLAVSFGFYGFIRKTAKTGPATGLFVETLVVAPFALAFVVFTFATSGPGVHADPGMMALFMLTGPATAVPLLLFAYGVRRLRLTTIGMLQYLAPSIQFLLAIFMFGEHLNTVRLVSFALIWLSLAVFSYDSFRQRSRARAADHVGDLVEG*