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SCNpilot_expt_500_bf_scaffold_4113_9

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 7899..8987

Top 3 Functional Annotations

Value Algorithm Source
HlyD family secretion protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MCC6_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 44.1
  • Coverage: 354.0
  • Bit_score: 287
  • Evalue 1.40e-74
HlyD family secretion protein {ECO:0000313|EMBL:ELS24140.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes KF707.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.1
  • Coverage: 354.0
  • Bit_score: 287
  • Evalue 2.00e-74
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 363.0
  • Bit_score: 277
  • Evalue 6.10e-72

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGAAGAAGATCGGTTTTGTCTGCCTTGCCGCGCTGAGCCTGGCGCTGGCGGGGTGTTCCGCGCAGTCCGATGAGCACAGCGATGCAGTGGCCGAGCACGTGCGGCCGGTGCGCATAGTGGTTGCAACCCGCTCGGCGGCTACCGCAAACCTCGTCTATACCGGCGAAGTTCTGCCACGCACGCAAACCGGCTTCGGCTTCAAGATGGGCGGCAGGCTGATCGAGCGGCTGGTGGATGTCGGCAGCACAGTGGCGCCCGGCGATGTGCTCGCCCGACTCGACCCGATCGATATCGAAAACCAGTTGCGCAGCAGCGAGGCCGACCTGGTCAGCGCTCTGGCGGGTCGCGATACCGCTGAAGCCGCATTCATCCGGCAGCAGACCCTGTTCGGCAGCGGCGTGATCACCCGGGCTCAGTTCGAGGCGGTCGAGCTCGAATTCAATGCCGCCAAGGCACGGGTGACCAATGCCGAAGCGGCGCTCGACACGGTGCGGGAAAACCTCAAGCAGACCGAACTCAAGGCCACTGCCGCCGGCGTCGTGATCCAGATCGACGGCAATGTCGGGCAGGTGGTTGCCGCGGGCCAGCCGGTGGTGATGATCGCCTCTAACGATCGGCGCGACGCGGCCTTCGACATTCCCGAGCAATTGCTTGAGCCCAAATTCTCCGCGGCCGCCGTGGAGGTGGCGTTGTTGTCCTATCCAGACATCCGCTTCTCCTCCCATATCCGCGAAGTGAGCCCGATTGCCGACCCGACCACCCGAACCTACCGAGTCCTGGTGGAGCTGACGGGAGCACCGGAGCAGATGTTCCTGGGCGCCGCCGTGACTGGCACCATCGACCTCGGCGGTGGCGATGTTTTCCGCCTGCCGTCCAGCGCCATCACCAGCCAGGACGGCAGACCGGCAGTGTTCGTGGTCGACCCCGAGACGCTGACGCTCGAGCGCAAGCCTGTGGCGCTGGCGCAGCAGACCAGCGCGCAAATCATTGTCGGAGATGGCCTCGACCAGGGAGACCTGGTGGTCACTGCCGGGGTCAGCAAATTGCGGCCCGGCCAAAGCGTGCGGCTCGAGGACGGCCAGAAGTGA
PROTEIN sequence
Length: 363
MKKIGFVCLAALSLALAGCSAQSDEHSDAVAEHVRPVRIVVATRSAATANLVYTGEVLPRTQTGFGFKMGGRLIERLVDVGSTVAPGDVLARLDPIDIENQLRSSEADLVSALAGRDTAEAAFIRQQTLFGSGVITRAQFEAVELEFNAAKARVTNAEAALDTVRENLKQTELKATAAGVVIQIDGNVGQVVAAGQPVVMIASNDRRDAAFDIPEQLLEPKFSAAAVEVALLSYPDIRFSSHIREVSPIADPTTRTYRVLVELTGAPEQMFLGAAVTGTIDLGGGDVFRLPSSAITSQDGRPAVFVVDPETLTLERKPVALAQQTSAQIIVGDGLDQGDLVVTAGVSKLRPGQSVRLEDGQK*