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SCNpilot_expt_500_bf_scaffold_4139_2

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(924..1859)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein RcpC/CpaB n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFS2_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 315.0
  • Bit_score: 290
  • Evalue 1.50e-75
Flp pilus assembly protein RcpC/CpaB {ECO:0000313|EMBL:KFC61313.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 314.0
  • Bit_score: 379
  • Evalue 5.70e-102
Flp pilus assembly protein RcpC/CpaB; K02279 pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 315.0
  • Bit_score: 290
  • Evalue 4.60e-76

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGAAGCCGGCGCGTATTATCCTGTTGGTAATTGCCCTCGTGGCTGGCGGCCTTGCCGCTTTCCTCGTCACACGCGGCAATCGCGCACCGGCACCACAGCAGGTCGTTACCCAGGTCGTTCCCGAAGCCAGGACCCAGGTGCTGGTGGCCAAGGGGCCAATCGGCATTGGTGAGCGTCTCACCACGAATTCGGTCGAATGGCAGGACTGGCCGGAAGGCGCGCTGCGTCCCGAATATGTCACCATTGCCGCCATGCCCGAAGCGCCATCTGAGCTGACCGGTTCGGTGGTGCGCTTCGAATTTTTCCCAGGCGAGCCGATCCGTGCCGCCAAGCTGGTCAATGCCGACCAGGGCTATCTCTCGGCCGTCCTTTCGTCTGGCATGCGCGGCGTCTCGGTGGGCGTGACGGCCGTGTCCAGCGCCGGCGGCTTCGTGGTACCGAACGACCATGTGGACGTGGTGCTGACCACCTCGACCAATATGGGGCAGCGCTCCGAAGTCATCCTGTCCAATGTGCGCGTTCTCGCTATCGGCAAGCGCCTGGGCGAAATGGGCGCCAGCGGCGGGAGCGAGCAATCGGAGAATGGCGCCCCGGTGCCGGTAACCTTCGACAAGAACACCATTGCCACTCTCGAGCTCGATCCGGCCCAGGCCGAAACCTTGATCAACGCCTCGATGCGTGGCCAACTCAGCCTGACGCTGCGCGCGGTAACCGACTTCAACCGCCCTGATATGGGGCGCCCCACAACGGCCAACCAGGCCGTGCGCCTGATCCGCTTCGGCAAGGAACAGTCAGTGATGGCCGGCGCCGGAGCTGGCGGCACCATGCCCGACCAGCAGCAGTTTGCGGCCGACTATTCGTCCGATAGCGACTACGTGTCGTCGGATCCCGAGATTCAGATGGCGCCCGAGGCGCCCCAGGTCCTCCCGCAGTAG
PROTEIN sequence
Length: 312
MKPARIILLVIALVAGGLAAFLVTRGNRAPAPQQVVTQVVPEARTQVLVAKGPIGIGERLTTNSVEWQDWPEGALRPEYVTIAAMPEAPSELTGSVVRFEFFPGEPIRAAKLVNADQGYLSAVLSSGMRGVSVGVTAVSSAGGFVVPNDHVDVVLTTSTNMGQRSEVILSNVRVLAIGKRLGEMGASGGSEQSENGAPVPVTFDKNTIATLELDPAQAETLINASMRGQLSLTLRAVTDFNRPDMGRPTTANQAVRLIRFGKEQSVMAGAGAGGTMPDQQQFAADYSSDSDYVSSDPEIQMAPEAPQVLPQ*