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SCNpilot_expt_500_bf_scaffold_5409_13

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(7753..8745)

Top 3 Functional Annotations

Value Algorithm Source
Sel1 repeat-containing protein (EC:3.5.2.6); K07126 similarity KEGG
DB: KEGG
  • Identity: 30.2
  • Coverage: 262.0
  • Bit_score: 99
  • Evalue 1.60e-18
Sel1 repeat protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM88_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 34.7
  • Coverage: 340.0
  • Bit_score: 151
  • Evalue 1.50e-33
Sel1 repeat protein {ECO:0000313|EMBL:EYR83227.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.7
  • Coverage: 340.0
  • Bit_score: 151
  • Evalue 2.10e-33

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
GTGGTTTTGAACCGCATTCTCGCTGCGACTTCGATGCTGGCTTTGGCATGGGCGCTGAGTGGACCCGCGCTGGCCGAGGATGCGGCCCAGACATGTGATGCACTGGCGGCCAGTGCCTTTGACCAGACGCGACCGGACGGGGTTCCCGGCGTGCCCTTCGACGCCATCGATGTCGCGGCGGCGCAAGAGGCGTGTCTCGCGGCTCTGGCGGAAGCGCCGTCGCCCCGCATTGCCTTTCAGCTTGGTCGCGCCCTTCATCGGGCCGGCGCTTTGGACGATGCCATCGGCTACTACATGCAGGCCGTCGAAGCGGGTCATGCTGAGGCCATGGTCGGTCTCGCCGAGGCTGGCCGCCAGAAGAGCGCCGAGGAAAGTGCCGCACTGACCGAAGCGGCCAGTGCGGCTGGCAGCGTGATCGGACGCTATAATCTGGCGGTGCTGAAACGCGACGGCGATGGGCTGACGCAGGATATCGCCGGCGCCATTGCGCTGTTCGAAGCCTCGGCCGCGGCAGGCGATGCGGAGGCAGCATATAATCTCGGTGTGCTTTATGATGAGGGCGAGCTGGTGCTGCGCGACGTCGGCAAGGCGCGGCAATTCTATGAGGCGGCGGTGGCCGACGGGCATAGCTTCGCCCGCGTCAATCTGGGCTACCTGCTGCTCGAGGGCAAGCCGGACGAGCAGGCGCGCGCAGAGGCGCTGGCGCTGTTTCGACTGGCTGCCGAAGAGGATGGCGACATCAATGCCGGGTTGCAACTGGGGCTGATGCTGCAGGACGGTAGCGCGGCAGAGCAGGCGGAAAGCGAGACGCTGGTTCTGGCGGCGTTGCGCGACCGGGATTTCGAGCTCGGCCGTTTCTTGCAGCAGAGTGAAACCGGCATCAGCCAAAGCAATGTCAAAGCCATTCAGGGTGAGCTGGGGGTACCGGCAAGTGGCGTGGTCGATGCCGCAACGCTCGAGGCTCTGCGCCGCTATTTTGACCATATGCCTTAA
PROTEIN sequence
Length: 331
VVLNRILAATSMLALAWALSGPALAEDAAQTCDALAASAFDQTRPDGVPGVPFDAIDVAAAQEACLAALAEAPSPRIAFQLGRALHRAGALDDAIGYYMQAVEAGHAEAMVGLAEAGRQKSAEESAALTEAASAAGSVIGRYNLAVLKRDGDGLTQDIAGAIALFEASAAAGDAEAAYNLGVLYDEGELVLRDVGKARQFYEAAVADGHSFARVNLGYLLLEGKPDEQARAEALALFRLAAEEDGDINAGLQLGLMLQDGSAAEQAESETLVLAALRDRDFELGRFLQQSETGISQSNVKAIQGELGVPASGVVDAATLEALRRYFDHMP*