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SCNpilot_expt_500_bf_scaffold_7599_1

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: 102..641

Top 3 Functional Annotations

Value Algorithm Source
Putative epimerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHH6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 178.0
  • Bit_score: 248
  • Evalue 6.30e-63
Isomerase {ECO:0000313|EMBL:KFL31552.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 178.0
  • Bit_score: 320
  • Evalue 1.40e-84
xylose isomerase family protein similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 178.0
  • Bit_score: 181
  • Evalue 2.30e-43

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Taxonomy

Devosia riboflavina → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGAAGCTCGGCATCAATCTGCTGTGCTTGACCGATCTGGTGACGGAAGCGCATCTGCCGATGATCGAAAAGATCAAGGCGGAAGGCTATGACGGCGTGGAAGTGCCGGTGCTGTCAGGCGATCCGGATCACTATGCCTGGCTTGGACGCGCGCTCGACGCCATGGGGCTCGAGCGTTGCACGACCTCCATTATCCCCAGCCCCGATGTCAGCCCGATTTCGAACGATGCGGAGACGCGTGAACGGGGCCGCCACCATCTCGACTGGGCGCTCGATTGCGCCATCGCCCTCGGGGCGCAGAGCGTCGGCGGGCCCATCCATGCCCCGATCGGCCATTTCACCGGTGCCGGTCCGACCGAGAACGAGCTCGCCTTTGGTGCCGAGGCTCACCGCGCCCTTGCCGAGCGGGCACAGGCCAATGGCATCTATCTCAGCCTCGAACACCTCAACCGATTCGAGACCTATTTTCTCAACACCACCAAGCAATGCCGCGACTATGCGCGCCGCGTTGATCACCCGGCCTGCCGGATCATGCTATGA
PROTEIN sequence
Length: 180
MKLGINLLCLTDLVTEAHLPMIEKIKAEGYDGVEVPVLSGDPDHYAWLGRALDAMGLERCTTSIIPSPDVSPISNDAETRERGRHHLDWALDCAIALGAQSVGGPIHAPIGHFTGAGPTENELAFGAEAHRALAERAQANGIYLSLEHLNRFETYFLNTTKQCRDYARRVDHPACRIML*