ggKbase home page

SCNpilot_expt_500_bf_scaffold_11872_8

Organism: SCNPILOT_EXPT_750_P_Devosia_62_26

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 11 / 38 MC: 2
Location: comp(4587..5441)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family n=2 Tax=Sinorhizobium medicae RepID=A6UGP6_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 275.0
  • Bit_score: 372
  • Evalue 4.60e-100
  • rbh
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 275.0
  • Bit_score: 372
  • Evalue 1.40e-100
  • rbh
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:ABR62826.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 275.0
  • Bit_score: 372
  • Evalue 6.40e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium medicae → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGCGCAACCGGCACAGGTCAGGGTGTTATCCGCCACCAGCCAGCTGCGCAGCGTGTTGCCCACCCTGTCGGACTCCGAGCGGCGCGTGGCGCTGTGGATCCTCGAACACCCCCAGGACGTGATGCGTCAATCGATGTCCGCCGTAGCGCAACTGGTCGAGGTCAGCGACACCACGGTATTGCGGATGTGTCGCGCCGCCGGCTTTGAGGGCTATACCGATCTCAAGCTGGCTTTGGCGCGCGAACCCTTCGTGCCAATGCCAGTATCGGGCGACGCGCCGCCTGCCGATGGGCTGCAACTGGCCCAGACCGTGTTTCGCGCCATTGGCCGAGCGCTCGACGACACGCTTGCCGTGCTCGACGAAAGCACGCTGACTCGCGCCATCGAGCAGTTCGCCGGTGCCCGCCACATCCTCGTCGGCGGCGTCGGCGGTTCGGGCATTGTCGCCCAGGCCTTCTACCAGCGCTGTTTCCGGCTGGGCCTGCGCTGCGACGCGCCGATCGATTCCCAATTGCAGATCATGCATGCCGCCGGCATGGGGCCACAGGACCTGGTGGTGGCCATTTCCTATTCCGGGATCACCAGCGATCCCGTGCTGCTGCTGCAGGAAGCGCGGGCCCGTGGCGCCGCCACCATCTGCATCACCGGCAATCGCCGCTCGCCGCTGGCGCAGCTGGCCGACACCACTCTGGTCAGCGTGTCCTACGAGCATGGCAGCGAGCCCATGGCGGCGCAGGTGGCGCAGCTGACGCTGATTGACGCCCTTTATGTGGCGCTGGCACAACGTTTGGGCAACCAGGCCCAACTCATCGAAGAGCGGATGGTCAATGCCATTCTGCCCAAATCCATCTAG
PROTEIN sequence
Length: 285
MAQPAQVRVLSATSQLRSVLPTLSDSERRVALWILEHPQDVMRQSMSAVAQLVEVSDTTVLRMCRAAGFEGYTDLKLALAREPFVPMPVSGDAPPADGLQLAQTVFRAIGRALDDTLAVLDESTLTRAIEQFAGARHILVGGVGGSGIVAQAFYQRCFRLGLRCDAPIDSQLQIMHAAGMGPQDLVVAISYSGITSDPVLLLQEARARGAATICITGNRRSPLAQLADTTLVSVSYEHGSEPMAAQVAQLTLIDALYVALAQRLGNQAQLIEERMVNAILPKSI*