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SCNpilot_expt_500_bf_scaffold_4809_4

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(2781..4160)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein TrbL n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4I0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 459.0
  • Bit_score: 868
  • Evalue 4.30e-249
  • rbh
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:EFI52860.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 459.0
  • Bit_score: 868
  • Evalue 6.00e-249
trbL1; P-type conjugative transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 459.0
  • Bit_score: 754
  • Evalue 1.70e-215
  • rbh

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGAGCGGCGCGGGCGTCATCGACAATTTCCTCGGGGTATTCACCCGATACATCGACTCCGGCTTCGGGCTGTTGTCCGGCGAAGTCGGCTTCATCGCCACCACGCTGATCGTCATCGACGTGACGCTCGCGGCCCTGTTCTGGAGCTGGGGCGCGGACGACGACATCATGGCGCGATTGGTGAAGAAGACACTGTTCGTCGGCGTCTTCGCCTATCTCATTTCCAACTGGAACAATCTCGCGAAGATCATCTTCGACAGTTTCGCCGGCCTTGGTCTGAAGGCGAGCGGCACCGGCTTCACCGTGCAGGATCTGCTCCGCCCCGGCAAGGTCGCGCAGACCGGCCTCGATGCTGCGCGGCCGCTGCTCGAATCCATCTCGCCATTGATGGGCTGGATCGCAGTGTTCGAGAACCTGATCCAGATCGCCTGCCTGCTGTTTGCTTGGGCGCTCGTCATCCTCGCCTTCTTCATTCTGGCGATCCAGCTTTTCGTGACGCTGATCGAGTTCAAGCTGTCCACGCTTGCCGGATTCGTGCTGATCCCGTTCGGCCTGTTTGGCAAGACTGCCTTCATGGCCGAAAGGGTCCTGGGAAACGTCGTCTCGTCCGGCATCAAGGTACTGGTGCTCGCCGTCGTCATCGGTATCGGCTCGACGCTGTTTAGCCAGTTCACGCAAGGATTCGGGGGCAATACGCCGTCCGTTGACGACGCGATGGCCATTGTTCTTGCCGCCTTGTCGCTCCTCGGTCTCGGCATCTTCGGCCCCGGCATCGCCAACGGCCTCGTGTCCGGCGGCCCGCAGCTCGGCGCCGGTGCAGCCATCGGCACCGGCCTTGCGGTTGGAGGCGCTGCCCTTGCCACTGGCGGCGGTGCGATGCTGGCGGCGCGAGGTGGAGCGGCAGCTCTTGCCGGCGGCGCGGCAGCAGTGCGTGGCGGCGCTGCCGCGGCAGGGGCCTCGTCGTCGGCTTACACGCTCGGTTCGCTGGGGCAGTCAGGCGCGGCCGGCGTCGCTTCCGGACTTGGCGGTGTTGCTCGCGCAGCCGGCTCCGTAGCCGTTTCGCCCCTTAAGCGCGCCGCCGCGCGTGCCGCCGACAGCGTTAAATCAAGCTATGTGGGCGGTGCCAATGGTTCGTTCGCGGCGACCGGCGGCTCCTCGACCATGGGCACGGTCGGCGGCGGCGCGGCAGCCGCTAATGACGCCTCCATCTCCGCCAGCGCATCGGCCAGCGCTCCGAACACTCCGCCGGCTTGGGCGCAACGTATGCGGCGCGGCGGACACATGAGTCATGCCGTCCAGACTACCGCACATGCCGTCCGCTCCGGCGATAGCCATGGTTCCGGCTCTTCCGTCAATCTTTCCGAAAGCGATCGCAAATGA
PROTEIN sequence
Length: 460
MSGAGVIDNFLGVFTRYIDSGFGLLSGEVGFIATTLIVIDVTLAALFWSWGADDDIMARLVKKTLFVGVFAYLISNWNNLAKIIFDSFAGLGLKASGTGFTVQDLLRPGKVAQTGLDAARPLLESISPLMGWIAVFENLIQIACLLFAWALVILAFFILAIQLFVTLIEFKLSTLAGFVLIPFGLFGKTAFMAERVLGNVVSSGIKVLVLAVVIGIGSTLFSQFTQGFGGNTPSVDDAMAIVLAALSLLGLGIFGPGIANGLVSGGPQLGAGAAIGTGLAVGGAALATGGGAMLAARGGAAALAGGAAAVRGGAAAAGASSSAYTLGSLGQSGAAGVASGLGGVARAAGSVAVSPLKRAAARAADSVKSSYVGGANGSFAATGGSSTMGTVGGGAAAANDASISASASASAPNTPPAWAQRMRRGGHMSHAVQTTAHAVRSGDSHGSGSSVNLSESDRK*