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SCNpilot_expt_500_bf_scaffold_4809_8

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(6482..7642)

Top 3 Functional Annotations

Value Algorithm Source
CagE, TrbE, VirB component of type IV transporter system, conserved region n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4H7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 386.0
  • Bit_score: 748
  • Evalue 3.20e-213
CagE, TrbE, VirB component of type IV transporter system, conserved region {ECO:0000313|EMBL:EFI52857.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 386.0
  • Bit_score: 748
  • Evalue 4.50e-213
trbE2; conjugal transfer protein trbE; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 386.0
  • Bit_score: 702
  • Evalue 6.30e-200

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1161
ATGATGAATCTTGCCGAATATCGTCGCGTCGCTTCTCGCCTTGCCGACTATTTGCCCTGGGTCGCGCTCGTTTCTGAAGGCGTCGTCCTCAACAAGGACGGCAGCTTCCAGCGCACGGCGCGCTTTCGCGGTCCCGATCTGGATTCCGCCGTGGCGGCCGAGCTGGTCGCGGTCGCCGGCCGCATCAACAACGCCTTCCGCCGTCTCGGCTCGGGCTGGAGTATCTTCGTCGAGGCGCAGCGCCATGAAGCCGCGACCTATCCGAACAGCAGGTTTCCCGATCCGGCTTCCGCTCTGGTCGATGCCGAACGCAAGGCCGACTTCGAGGAAGCGGGCGCGCATTTCGTGTCGAGCTACTTCCTCACATTCCTCTATTTGCCGCCGGCCGAGGAAGCGGCGCGCACGGAAGCCTGGCTCTACGAAGGACGCGAACGCTCAGGCGTCGATCCCCATGAAATCCTGCGCGCCTTCACCGATCGCACCGACCGCGTGCTGGCGCTGCTCGATGGCTTCATGCCCGAATGCGCCTGGCTCGACGATGCGCAAACACTGACCTACCTGCATTCCTGCGTTTCGACGAAGCGTCATCTCGTCCGCGTGCCGGAGACGCCGATCTATCTCGACGCGCTACTGACCGACCAGCCGCTGACCGGCGGCCTGGAGCCGCGCCTTGGCGACCAGCATCTGCGCATCCTCACCATCGTCGGGTTCCCCACCACGACGACGCCCGGTCTGCTCGATGAGCTGAACCGGCTGCCGTTTCCCTATCGCTGGAGCACGCGCGCGATTCTGCTCGACAAGCTGGAGGCGACCAGGTTGTTGACGAAGATCAGGCGGCAATGGTTCGCCAAGCGCAAGTCGATCGCAGCCATCCTGAAAGAGGTGATGACCAACGAGCAATCCGTGCTCGTGGACACCGACGCCGCGAACAAGGCGGCGGACGCCGATATGGCCCTGCAGGAACTTGGGCAAGATGTCGCCGGCATGGCCTACGTCACCGCGACCATCACGGTCTGGGATACAGAGGTGCGTCTTGCGGATGAGAAGCTGCGGCTGGTCGAGAAGGTCATCCAGGGCCACGATTTCGCGGCCATGACCGAGACCGTCAACGCGGTGGATGCGTGGCTCGGTTCTCTGCCGGGGCACGCATACGCGCGGTGA
PROTEIN sequence
Length: 387
MMNLAEYRRVASRLADYLPWVALVSEGVVLNKDGSFQRTARFRGPDLDSAVAAELVAVAGRINNAFRRLGSGWSIFVEAQRHEAATYPNSRFPDPASALVDAERKADFEEAGAHFVSSYFLTFLYLPPAEEAARTEAWLYEGRERSGVDPHEILRAFTDRTDRVLALLDGFMPECAWLDDAQTLTYLHSCVSTKRHLVRVPETPIYLDALLTDQPLTGGLEPRLGDQHLRILTIVGFPTTTTPGLLDELNRLPFPYRWSTRAILLDKLEATRLLTKIRRQWFAKRKSIAAILKEVMTNEQSVLVDTDAANKAADADMALQELGQDVAGMAYVTATITVWDTEVRLADEKLRLVEKVIQGHDFAAMTETVNAVDAWLGSLPGHAYAR*