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SCNpilot_expt_500_bf_scaffold_4809_9

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(7656..7937)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbB n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4H6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 188
  • Evalue 3.10e-45
Conjugal transfer protein TrbB {ECO:0000313|EMBL:EFI52856.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 188
  • Evalue 4.30e-45
conjugal transfer protein TrbB; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 93.0
  • Bit_score: 173
  • Evalue 2.50e-41

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 282
ATGGCGGTGGCTTTCGAACAACTCGACGCCGTGCCGGGATTTACCGCTCCCGTCCATCGGGCGTTGACCGAGCACATCATGCTCGGCGGCGCTCCCAGAAGTATCGCCATCATGAATAGCACGCTCGCCGGCGCAGTCGGCCTCGGCCTGCGCCTCTGGCTGGTCGGCCTTGTCATCTGGGCGATCGGTCACTTCGCCGCCGTCTGGGCGGCGAAGCGCGATCCGCTGTTCGTGGAAGTCGGGCGAAGGCATCTGCGCATCCCGGCTTTTCTGGCGGTGTGA
PROTEIN sequence
Length: 94
MAVAFEQLDAVPGFTAPVHRALTEHIMLGGAPRSIAIMNSTLAGAVGLGLRLWLVGLVIWAIGHFAAVWAAKRDPLFVEVGRRHLRIPAFLAV*