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SCNpilot_expt_500_bf_scaffold_4809_12

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(9438..9770)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 135.0
  • Bit_score: 198
  • Evalue 3.80e-48
Ribonuclease VapC n=1 Tax=Afipia sp. 1NLS2 RepID=D6V4H2_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 135.0
  • Bit_score: 198
  • Evalue 2.70e-48
putative virulence associated protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 133.0
  • Bit_score: 108
  • Evalue 2.00e-21

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGACGACATGGCTTCTCGACACCAATGCTGTCATCGCGTTGGTGACGCGCCGGTCGGAGGCGCTCTTGCGCAAGGTTGAATCCTGCGAGCCTGGCGCGCTCGCGGTTTCTTCCGTGGTCGCCCATGAACTCTACTTCGATCTCGAGCGTGAGGATGCGCGGGCGGCCGGCGAGATCAGGGCGGAGCTTGCGCGGCGCGGCACGCCGGTCGGCCCCTATGACGTCCTGATCGCCGGTCAAGCGATGGCGCGCGGCCTGCCGCTCGTCACCAACAACACCGCCGAGTTCGAGCGCGTCGCCGGATGGCGGCTGGAGGATTGGACCAAGGATTGA
PROTEIN sequence
Length: 111
MTTWLLDTNAVIALVTRRSEALLRKVESCEPGALAVSSVVAHELYFDLEREDARAAGEIRAELARRGTPVGPYDVLIAGQAMARGLPLVTNNTAEFERVAGWRLEDWTKD*