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SCNpilot_expt_500_bf_scaffold_4904_13

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: 11599..12144

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MarR family n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2ISE4_RHOP2 similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 188.0
  • Bit_score: 270
  • Evalue 1.20e-69
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 188.0
  • Bit_score: 270
  • Evalue 3.80e-70
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABD08866.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 188.0
  • Bit_score: 270
  • Evalue 1.70e-69

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGGCTGACATAAAATTCGTGCGAGCGGACATCGGCCCGACCGGCTCCGAGCCGTCGTCGGAGGCGGCGCCGGGGCATTTGCGCTGGGACATCATCGAACTGCTGTTTTTCGCCTACCGCGACTTCGTCGGCGATGCCGATCATGTGCTGGAAGCCTTCGGCTTCGGACGGGCGCATCACCGGGTGATGCACTTCGTGCATCGCTATCCGGGACTGACGGTTGCCGATCTGCTCGACGTGTTGCGCATCACCAAGCAATCACTCGGTCGTGTTCTCAAGCAATTGCTCGATGAAGGCTATATTGTCCAGCGCGCGGGCGATCATGATCGCCGGCAGCGCCTGCTGTTCGCCACCGCGAAAGGTGAGGCGCTGGTGGCCAAGCTTGCTGGCCTGCAGACCGACCGTATCACGCGCGCGTTGCGTGGATTCAGTGCATCCGATGCCGAAGCGGTTGCCCGCTTCCTGCGAGCCATGATCGATCGCGACGATCCCGACAAGGTGCTGGAGCAGTTGCTCGACCATAACCATTCAGCCGCGAAGGACTAA
PROTEIN sequence
Length: 182
MADIKFVRADIGPTGSEPSSEAAPGHLRWDIIELLFFAYRDFVGDADHVLEAFGFGRAHHRVMHFVHRYPGLTVADLLDVLRITKQSLGRVLKQLLDEGYIVQRAGDHDRRQRLLFATAKGEALVAKLAGLQTDRITRALRGFSASDAEAVARFLRAMIDRDDPDKVLEQLLDHNHSAAKD*