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SCNpilot_expt_500_bf_scaffold_15512_9

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: 5865..6425

Top 3 Functional Annotations

Value Algorithm Source
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 180.0
  • Bit_score: 363
  • Evalue 3.40e-98
3-isopropylmalate dehydratase large subunit {ECO:0000255|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01026};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.7
  • Coverage: 180.0
  • Bit_score: 363
  • Evalue 1.50e-97
3-isopropylmalate dehydratase large subunit n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=LEUC_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 180.0
  • Bit_score: 363
  • Evalue 1.10e-97

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGTCCGATTCAAAATCCGCCAGCACCCTGTACGACAAGATCTGGAACGATCATTTGGTCCACGAGGCCGATGACGGCACCTGCCTGCTCTACATCGACCGTCATCTGGTGCACGAAGTCACCTCGCCGCAGGCGTTCGAGGGTCTGCGCACCACCGGCCGCAAGGTTCATGCGCCGGAGAAGACGCTCGCGGTGGTCGATCACAACGTCCCGACCACCGACCGCAGCAAGCCCAATCCCGATCCGGAAAGCGCGGAGCAGATCGCTGCGCTGGCGCAGAACGCCAAGGACTTCGGCATCGAGTACTACAACGAGTTCGACAAGCGGCAGGGTATCGTGCACGTCATCGGCCCCGAGCAGGGCTTTACCCTGCCCGGCACCACCATCGTCTGCGGTGACAGCCACACCTCGACGCACGGCGCGTTCGGCGCGCTGGCGCACGGCATCGGCACTTCCGAAGTCGAACACGTGCTGGCAACGCAGACGCTGATCCAGAAGAAGGCCAAGAACATGCGCGCCGTCGTCGATGGCAAATTGCCCGACGGCGTCACCGCCAAGGAT
PROTEIN sequence
Length: 187
MSDSKSASTLYDKIWNDHLVHEADDGTCLLYIDRHLVHEVTSPQAFEGLRTTGRKVHAPEKTLAVVDHNVPTTDRSKPNPDPESAEQIAALAQNAKDFGIEYYNEFDKRQGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRAVVDGKLPDGVTAKD