ggKbase home page

SCNpilot_expt_500_bf_scaffold_2118_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_66_14

near complete RP 45 / 55 MC: 3 BSCG 43 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 2049..2846

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI000375351A similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 233.0
  • Bit_score: 237
  • Evalue 1.30e-59
Histidine utilization repressor {ECO:0000313|EMBL:EIM30478.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 229.0
  • Bit_score: 236
  • Evalue 3.90e-59
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 233.0
  • Bit_score: 235
  • Evalue 2.00e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGACGACCAGATCAATTGCGGCCGCGGCACAAGCTGATCTGCCGGAGCCTGCCCCGGCGATCGCGCAGGCCGCGAGCCTGTCGGAAACCATCCAGCGCGACATCGAGGACAAGATCATGTCGGGCAAATGGGCCCCGGGCGCCCGGATCCCCAACGAGTCCGAGTTCATGACCGAGTACAAATGCTCGCGCATGACCGTCAACCGCGTGCTGTCGCGCCTGTCGGAACGCGGCCTGATCGTCAGGCGGCGCAAGGCAGGTTCGTTCGTTGCATCGCCACGCAGCGACAGCGCCATGTTCCTGCAAATCCGCGACTTCGCCCGCGAGGCGGCGGGCCAGGGCCGGCGCTATCGCCACGAGATCCTGCTGCGCCGGGCTGAAAGACTGTCAGACGCGCGGGCCCGCAGCCTGCAGCTGGAGAGAAACCAGCAGGTGCTGCGGGTGCTCTGCCTGCATGTGCTCGACGACCAGCCCAATGCCTATGAGGATCGCGTCATCTCGCTCGACAAGGTGGCGGCGGTGCGCGACGAATCCTTCGACGAGGTGCCGCCGGGCACCTGGCTGCTGGGCCACGTGCCCTGGTCCGAGGCGCGCCATACCATCAAGGCGGTGAATGCCGACGCGACGCTCGCCGGCATCCTCGGCATCGAAGAACACGCGGCCTGCCTCGTGCTCAACCGCCGCACCTGGCACCAGGGCGAGTTTGTCACCGACGTGGAAATCACCTACCCCGGCGCCGGGCACGAACTGACCGGCGAGTTCTCGTCGACATTCGGTGAACTGGCGCCCAACAAATAG
PROTEIN sequence
Length: 266
MTTRSIAAAAQADLPEPAPAIAQAASLSETIQRDIEDKIMSGKWAPGARIPNESEFMTEYKCSRMTVNRVLSRLSERGLIVRRRKAGSFVASPRSDSAMFLQIRDFAREAAGQGRRYRHEILLRRAERLSDARARSLQLERNQQVLRVLCLHVLDDQPNAYEDRVISLDKVAAVRDESFDEVPPGTWLLGHVPWSEARHTIKAVNADATLAGILGIEEHAACLVLNRRTWHQGEFVTDVEITYPGAGHELTGEFSSTFGELAPNK*