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SCNpilot_expt_500_bf_scaffold_8711_8

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: 5556..6518

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GC37_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 320.0
  • Bit_score: 596
  • Evalue 2.20e-167
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 320.0
  • Bit_score: 596
  • Evalue 6.90e-168
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB83611.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 320.0
  • Bit_score: 596
  • Evalue 3.10e-167

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGATCTCCCACCGCCTGCAAGACACCGCGCTGCGCTACTTCCTCGAAGTGGTGCGCAGCGGCTCGGTCAGCGAGGCCGCCGCGCGGCTGAGCGTCTCGCCCTCGGCCGTGAGCCGGCAGGTGGCGGGGCTCGAAGACCTGCTGGGCCTGCCGCTGTTCGAACGCCGCCCGCGCGGCATGGTGCCCAGCGCCGCGGGCGAGCTGCTGGCCGCCCACGCGCGGCGCGGCGCGCTGGAGGCCGACCGCGTGGTCTCCGACATCCAGGCGCTGCGCGGACTGCGGCGCGGGCTCATCCGCGTGTGCGCCTCGGGCGGCTTCGCGGTGGAGTTCCTGCCGCGCGCCATGGCGCTCTTTCGCGCCGGGCACCCCGGCATGCAGTTCCACATGCGCGCGGCCGCGCCCGCGGCGGTGACGCAGGCGGTGCTGGACGGCGACGCCGACATCGGCCTGACCTACAGCCGCGCGGCCGAGCGCGACATCGAGGTGCAGCACCGCCAGGTCTCGCCCGTGATCGCCATCATGCGGCCCGACCACCCGCTGGCGCGCCACGCGAGCGTGACGCTCGCGCAGATGCACCCCTACCCCATCGCGCTGCCCGACGGCGACAACACCGCGCGCCAGCTCTTCGACATCGCGAGCAGCCAGCGGCGCCTGGTGTTCGAACCCGCGCTGGTCACCGGGCAGTTCGAGGCACTCACGCACTTCGTGCTGCACGGCGGCGGCCTCTCGCTCGCGGGCGAGGTCACGGTGCGCGAGCGCGTGCGCCGCGGCGAGCTGCATGCCGCGCAGATCCGCGAGCGCGCGGTGAACGGCCGCGCGATCGAGCTGCAGACGCTCGCGGGCCGCACGCTGCCCGAGGGCGTGCACGCCTTCCTCGGCCACCTGCGCGCGCTGCTGCCCGCGCCGCCCGCGCAGAGGGCGGCGACAATCGCGCCCGACCCGAAGAACGACACCCCGCCATGA
PROTEIN sequence
Length: 321
MISHRLQDTALRYFLEVVRSGSVSEAAARLSVSPSAVSRQVAGLEDLLGLPLFERRPRGMVPSAAGELLAAHARRGALEADRVVSDIQALRGLRRGLIRVCASGGFAVEFLPRAMALFRAGHPGMQFHMRAAAPAAVTQAVLDGDADIGLTYSRAAERDIEVQHRQVSPVIAIMRPDHPLARHASVTLAQMHPYPIALPDGDNTARQLFDIASSQRRLVFEPALVTGQFEALTHFVLHGGGLSLAGEVTVRERVRRGELHAAQIRERAVNGRAIELQTLAGRTLPEGVHAFLGHLRALLPAPPAQRAATIAPDPKNDTPP*