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SCNpilot_expt_500_bf_scaffold_15360_2

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: 611..1459

Top 3 Functional Annotations

Value Algorithm Source
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 96.5
  • Coverage: 282.0
  • Bit_score: 532
  • Evalue 6.30e-149
  • rbh
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 282.0
  • Bit_score: 532
  • Evalue 2.80e-148
Shikimate dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TR48_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 282.0
  • Bit_score: 532
  • Evalue 2.00e-148
  • rbh

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGACCACCTCTCTTGATCTCTACTGCGTGATGGGCAACCCCATCGCCCACAGCCGCTCGCCCTGGATACACGCGCGCTTCGCCCGGCTCACGGGCGAGCCGCTGCACTACGAACGCCGCCTCGTGCCCATCGACGGCTTCGCCCGGGCGCTGCGCGACTTCGCCGCCGAGGGCGGGCGCGGCTGCAACGTCACCGTGCCCTTCAAGCTCGAAGCCGCGCAGCTGGCCACCCACCGCAGCGAACGCGTGCAGCTGGCCGGCGCGGCCAACACCCTCAGCTTGCGGGACGGCGCCATCCACGCCGACAACACCGACGGCCTGGGCCTGGTGGCCGACATCGAACAGGGCGCCGGCGTGCCGCTGGCCGGGCGCGACGTGCTGCTGGTGGGCGCGGGCGGCGCGGCCGCGGGCGTGCTGGGGCCGCTGCTGCGGCGCCGGCCCCGCCGCATCGCCGTGGTGAACCGCACGGCCGCGCGCGCCCAGGCCCTGGTGGCCAGCCACGCGGCACTCGCATCACTACAAAAAACAGAGCTGCTGGCGCTTGACATACAAGCGCCGGGGGCCGATTTCGACATCATCATCAACGCCACCGCCAGCAGCCTGGAAGGCGCCGCCGCCCCCGTGCCCGCCAGCGTGCTGCGCCCCGGCAGCCTGGCCTACGACATGATGTACGGCCCCGCCGCGCAGGGCTTCCTGGACTGGGCCGCGCAGCACGGCGCCCAGCCGCGCGACGGCCTGGGCATGCTGGTGGAACAGGCGGCCGAGGCCTTCCTGATCTGGCGCGGCCTGCGCCCGCCCTCCGCCCAGGTGCTGGCCGAGCTGCGCGCGGCCATCGCCGCGGGCGCCTGA
PROTEIN sequence
Length: 283
MTTSLDLYCVMGNPIAHSRSPWIHARFARLTGEPLHYERRLVPIDGFARALRDFAAEGGRGCNVTVPFKLEAAQLATHRSERVQLAGAANTLSLRDGAIHADNTDGLGLVADIEQGAGVPLAGRDVLLVGAGGAAAGVLGPLLRRRPRRIAVVNRTAARAQALVASHAALASLQKTELLALDIQAPGADFDIIINATASSLEGAAAPVPASVLRPGSLAYDMMYGPAAQGFLDWAAQHGAQPRDGLGMLVEQAAEAFLIWRGLRPPSAQVLAELRAAIAAGA*