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SCNpilot_expt_500_bf_scaffold_3544_3

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

partial RP 9 / 55 BSCG 11 / 51 ASCG 7 / 38
Location: 1078..1953

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 291.0
  • Bit_score: 568
  • Evalue 4.80e-159
truA; pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 281.0
  • Bit_score: 411
  • Evalue 2.90e-112
tRNA pseudouridine synthase A n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWI7_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 291.0
  • Bit_score: 568
  • Evalue 3.40e-159
  • rbh

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
GTGACGGCAGACGGCGTGGTCACCGATCCGCCGGGAGGCGTGCGTCTGCGCCTCGATCTCGCCTACGACGGCACCGACTTCCGCGGGTGGGCGCGTCAGCCGGGCCTGCGCACCGTCCAGGGCACGCTCGAAACGGCGCTGGCCCGTGTGCTCGGCGGCGATCCGCAGCTGGTGGTGGCCGGCCGAACCGATGCCGGTGTGCACGCGGCCGGGCAGGTCGCCCACCTCGATCTCACCGATCGGCAGCAGGAGCGCCTGGCCGCGAGCCGCGCCGGCACCGCCGAGGCGCTCGCTGCCCGCATCAACGGTGTGCTCGGCGCGTATCCCGACGTCGTGGTGCACCGCACCGCCGTGGCGCCGGACGGATTCGATGCGAGGTTCTCGGCCGTCTGGCGCCGCTACGAGTACCGCATCGCCGATCGCACCGCCGGATACGATCCCCTCGAGCGGGTGCGCACGACCAGCGTGAAGGCCGCGCTGGACGTGGAGGCGATGGATGCCGCCGCGCGGTCCCTCATCGGTCTGCACGACTTCGCGGCGTACTGCAAGTGGCGGGAGGGGGCGACGACCATCCGCACCCTGCTGGAGTTCGGTTGGGGTCGAGACGATCGCGGCATCCTGATCGCGCGTGTGAAGGCCGACGCGTTCTGCCACAGCATGGTGCGCGCCCTCGTCGGCGCGTGCGCGGCGGTCGGCGAAGGGCGTCTGCAGGTCGCGGACGTCGCCGCGATCCGCGACGGCGGGGTGCGCACCAGCGACGTCAAGGTGCTCGCGGCCCGCGGCCTCACCCTCACCGCCGTCGGCTACCCCGCCGACGATCTGCTCGGCTCACGCGCCGCGCAGACTCGCGCACGCCGCAGCTTGGACGCCGGCTGA
PROTEIN sequence
Length: 292
VTADGVVTDPPGGVRLRLDLAYDGTDFRGWARQPGLRTVQGTLETALARVLGGDPQLVVAGRTDAGVHAAGQVAHLDLTDRQQERLAASRAGTAEALAARINGVLGAYPDVVVHRTAVAPDGFDARFSAVWRRYEYRIADRTAGYDPLERVRTTSVKAALDVEAMDAAARSLIGLHDFAAYCKWREGATTIRTLLEFGWGRDDRGILIARVKADAFCHSMVRALVGACAAVGEGRLQVADVAAIRDGGVRTSDVKVLAARGLTLTAVGYPADDLLGSRAAQTRARRSLDAG*