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SCNpilot_expt_500_bf_scaffold_10846_3

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(1798..2697)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225BD8C similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 296.0
  • Bit_score: 219
  • Evalue 4.00e-54
Uncharacterized protein {ECO:0000313|EMBL:AIL13547.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 299.0
  • Bit_score: 519
  • Evalue 4.50e-144
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 294.0
  • Bit_score: 203
  • Evalue 9.30e-50

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGATCTCGATAAATTACGTATCTTTTATTATGCTGCTAAAGCAAAGAGTTTCACAAACTGTGATCTCAATTTAAGTCCTTCTGCCGTTAGTCGACATATTAGTGATCTTGAGCATCGTCTTAAAGCTCCTTTATTTTATCGACAAGTTAGAGGTCTCAGCTTAACAGAGCAAGGTGAAGTTCTTTTTGAATCCGCTCACAAAGTTTTTGCAGAACTTGATGCTGCACGTTCATTGTTGAATGAAGTAGGCGTTGAACCTCAGGGTGTATTAAGAGTTGCTATTCCAAGTGGTTGGACATCAACCGTACTTATTCAATACATTGCAGAATTTTTAAAACGATACCCTAAAATTCGCCTTCACATGACACCTATTGAACGTCTTAACGACTTTAATGTTACTGAAGTAGATGCTGCTATTATACCTTTTACCCCGGATCGTCCTACTTGGATTCAACGTCATCTTATGCAATTTCAATTAAAATTATTTGCAAGCCCAAACTATCTTGAAAATCATGGAACGCCAGAAACTATTGAGGATTTAACTTCTCACAAAATGATTTCGCATATAACCAACGGTTCTTCTCTATCTGATCTTAAATGGCATCTATCCTTAGGTACAAAAGATGATAAAGAAAGAGAACCTTATTTAGTCGTCTGCAGCCCTTATCACGCTGCTGAACAAGGCTTAGGAATTGTGACCCTTGCACAAGAAAATTTGCTTTTAAGAAGTGGAAAACTTGTTGAAGTTCTGCCTAATCTAAATGGACCAACGATAGATGCTTATTATGTTTATCCAGAGCATTTAAAAGAATCAAAAAAAGTACGTTTATTAGGAGATTATATTGTTGATTTCATCCGAATTACAAAAAATCTTTCTAATCTTCCAAAAGTAGCTTAA
PROTEIN sequence
Length: 300
MDLDKLRIFYYAAKAKSFTNCDLNLSPSAVSRHISDLEHRLKAPLFYRQVRGLSLTEQGEVLFESAHKVFAELDAARSLLNEVGVEPQGVLRVAIPSGWTSTVLIQYIAEFLKRYPKIRLHMTPIERLNDFNVTEVDAAIIPFTPDRPTWIQRHLMQFQLKLFASPNYLENHGTPETIEDLTSHKMISHITNGSSLSDLKWHLSLGTKDDKEREPYLVVCSPYHAAEQGLGIVTLAQENLLLRSGKLVEVLPNLNGPTIDAYYVYPEHLKESKKVRLLGDYIVDFIRITKNLSNLPKVA*