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SCNpilot_expt_500_bf_scaffold_19133_3

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 1563..2888

Top 3 Functional Annotations

Value Algorithm Source
signal recognition particle n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225A8A2 similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 449.0
  • Bit_score: 569
  • Evalue 2.30e-159
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 449.0
  • Bit_score: 779
  • Evalue 3.50e-222
ffh; GTPase of the signal recognition particle; K03106 signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 450.0
  • Bit_score: 554
  • Evalue 2.40e-155

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1326
ATGTTTAATAATTTAAGTCAAAAACTTGGCGAAATCTTTGATAAATTAAAAAAGAGAGGTGCTCTTAATGAGGCTGATGTTGATGCTGCTTTAAGGGAGATTCGTGTTGCTCTGCTTGAAGCTGATGTCGCTTTACCGGTGGTTAAAGATTTTATTGCTCAAGTTAAAGAACGCGCCATTGGTCAAGAAGTTATTAAGAGTATTACCCCTGGTCAAATGGTTGTGAAAATTGTTCACGACCAATTAATTGAAGTTCTGGGCAGCGAAAACGTTGCTCTTAATGTCACAACGCCGCCAGCTGTGATGATGATCGTTGGTTTACAAGGTTCTGGTAAAACAACCTCAACAGCAAAAATAGCTCGTTTCTTGAAAGCCAAAAAGAATAAAAAAGTATTGATGGCTTCTGTTGATATTTATCGTCCAGCAGCGCGTGAGCAGCTTGAAATCCTAGGGCGTCAAGTTGATGTTGATACGGTAGAAATCATTGAGGCAGAAAAGCCTTTAGAGACTGCTAAAAGAGCCTACAATAAAGCAAAAATTGAAGGTTATGATGTTCTCTTGCTTGATACGGCCGGTCGCTTGCATATTGATGAAGATCTTATGGAAGAGTTAACGGCTTTAAAAAAAGCACTCAATCCTATTGAAACGCTTTTGGTTGCAGATGCTATGACAGGGCAAGATGCCGTCAATATTGCGCGCAATTTTCAAGAAAAAGTCGGATTAAGTGGGCTTATCCTTACACGCGCGGATGGCGATGGACGTGGCGGCGCGGCCTTGTCTATTAAGGCTATCACAGGATGTCCCATTAAGTTATTAGGTGTCGGTGAGCATCTTGATCAAATAGAAGAATTCCATCCTGAGCGGATTGCCGGGCGTATTCTTGATATGGGAGACGTCGTTGGTCTTGTTGAAAAGGCGGTAGAAGCAATTGATCGTGAGGAAGCAGAAGAACTGGCTCGAAAGGCCGGCAAAGGTGAATTTGATTTAAATGATCTTGCTTCTCAACTACGTCAAGTATCAAAAATGGGAGGAATGGGCGGCCTCCTGTCAATGTTGCCTGGTGTTGGAAAAATAAAAGAGCAAATCCAAGATGCCGGCATTAGCGATAAACTTGTTAGTTCTATGACCCTGAAGGAGCGTAAAAATTATAAGCTCTTAAATGGCTCTAGACGACGACGCATCGCTGATGGTTCAGGAACAACGGTCGCTGATGTAAATCGACTATTAAAACAATTCCAAGATATGCGCGATATGATGAAAAGAATGTCTAAAATGGGAGAAAAAGGATTTAAAAGACAAGGTCTGAGAGGACTTTTGGGAAGATAA
PROTEIN sequence
Length: 442
MFNNLSQKLGEIFDKLKKRGALNEADVDAALREIRVALLEADVALPVVKDFIAQVKERAIGQEVIKSITPGQMVVKIVHDQLIEVLGSENVALNVTTPPAVMMIVGLQGSGKTTSTAKIARFLKAKKNKKVLMASVDIYRPAAREQLEILGRQVDVDTVEIIEAEKPLETAKRAYNKAKIEGYDVLLLDTAGRLHIDEDLMEELTALKKALNPIETLLVADAMTGQDAVNIARNFQEKVGLSGLILTRADGDGRGGAALSIKAITGCPIKLLGVGEHLDQIEEFHPERIAGRILDMGDVVGLVEKAVEAIDREEAEELARKAGKGEFDLNDLASQLRQVSKMGGMGGLLSMLPGVGKIKEQIQDAGISDKLVSSMTLKERKNYKLLNGSRRRRIADGSGTTVADVNRLLKQFQDMRDMMKRMSKMGEKGFKRQGLRGLLGR*