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SCNpilot_expt_500_bf_scaffold_19133_5

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 3500..4021

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVP2_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 156.0
  • Bit_score: 139
  • Evalue 4.00e-30
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 156.0
  • Bit_score: 139
  • Evalue 5.60e-30
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 155.0
  • Bit_score: 138
  • Evalue 1.60e-30

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Taxonomy

Labrenzia alexandrii → Labrenzia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGGGCGTCGTTGCTTCTGCGCACGGGGTTCAAGGTCAAGTGAAAATAAAAATTTTTGCGACCTCGCCTACGTCTTTTATGACGCATAAAAAATTTTCAGATAAATCTGGGAAACAACTTTTTTTATTTAAAAATTTTTCTGTTTTTAAAGAAAATATTATTATTGGAACTTTAGAAGAGGTTACTACGCGTAATCAGGCTGAAAATTTGAAAGGAACTGAACTCTACATCTCAAGAGACCAACTTCCCTCAATTAAGGATGAAGAATATTATTATGAAGATCTTATTGGTTTAGAAGTGCGAGATAATAGTGGTGAACAGATTGGCGTTGTGAAGGCAGTTTATAACTTTGGCAGTGGAGATCTCATAGAAATTAAGCTTTCTGATTCTCGTGAAACTGTTGTTCTTCCTTTTACGCGAGAGGCTATCCCAACAGTTTCGATTTCAGATGGGTATCTCATTATAAATCAGATTGTTCTGAACCAGTTTAGGACGACTAAAAGAGATGAGAAATCTTTATAA
PROTEIN sequence
Length: 174
MGVVASAHGVQGQVKIKIFATSPTSFMTHKKFSDKSGKQLFLFKNFSVFKENIIIGTLEEVTTRNQAENLKGTELYISRDQLPSIKDEEYYYEDLIGLEVRDNSGEQIGVVKAVYNFGSGDLIEIKLSDSRETVVLPFTREAIPTVSISDGYLIINQIVLNQFRTTKRDEKSL*