ggKbase home page

SCNpilot_expt_500_bf_scaffold_30670_2

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

partial RP 1 / 55 BSCG 2 / 51 ASCG 1 / 38
Location: 411..1160

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2L4F0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 250.0
  • Bit_score: 374
  • Evalue 8.10e-101
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:EUB98516.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 250.0
  • Bit_score: 374
  • Evalue 1.10e-100
Periplasmic dipeptide transport protein; K12368 dipeptide transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 250.0
  • Bit_score: 344
  • Evalue 2.20e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGAAATCGATTGTCGGCCTGACATTTGCAGCCTTGCTGGCCTCGTCGCCGGTCTATGCGTCGACGCTGTCCGTCTGCATCGAGGGGTCGCCCGAGATATTCAATCCGGAGCTCTCAAGCAGCGGCACGACCTTGTTCGTGCTTGGCCAGATCTACGACAATCTGGTGTCCGTGAAGCAGGGTTCTTCAGAGATCGAGCCCGCGCTGGCTGAAAGCTGGACCGTTTCCGCCGATGCGAAGACCTATACGTTCAAGCTGCGCAAGGGCGTGAAGTGGCAATCGAACGATGCCTTCACGCCCAAGCGTGACTTCAACGCCGACGACGTGGTCTTCACCTTCCAGCGCATGATGGACCCGGCCAATCCCTATTCCAAGGTCAATGGCGGCGAATACACCACCTTCCAGACACGGCTTGCCGATACGCTGCAAAGCGTGAAGAAGATCGACGACGACACCGTCGCCTTCACGCTGAAGGAGCCGCTGGCGCCGTTTATCGGCATCATGGCGCACCAATCGCTCGCCATCACGTCGGCGGAATATGCCGATGCCATGTCCAAGGCTGGCACGCCGGAGCAATTCGATCGCCAACCGATCGGAACCGGCGCCTTCCAGTTGCAGGATTATCAGGCCGACACTGCCGTGCGCCTGATCCCGTTTGCCAACACCTGGGGCGCGGCCATCGGCGACGAATCCCGCACGCCGAAGGTCGACGCTGTCGTTATGGCGATCAGCACCGACGCCACGGTTCGC
PROTEIN sequence
Length: 250
MKSIVGLTFAALLASSPVYASTLSVCIEGSPEIFNPELSSSGTTLFVLGQIYDNLVSVKQGSSEIEPALAESWTVSADAKTYTFKLRKGVKWQSNDAFTPKRDFNADDVVFTFQRMMDPANPYSKVNGGEYTTFQTRLADTLQSVKKIDDDTVAFTLKEPLAPFIGIMAHQSLAITSAEYADAMSKAGTPEQFDRQPIGTGAFQLQDYQADTAVRLIPFANTWGAAIGDESRTPKVDAVVMAISTDATVR