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SCNpilot_cont_1000_bf_scaffold_476_11

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: 8496..8981

Top 3 Functional Annotations

Value Algorithm Source
Antitermination factor NusG n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FDM4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 159.0
  • Bit_score: 128
  • Evalue 8.50e-27
Transcriptional regulator {ECO:0000313|EMBL:EZQ16923.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 157.0
  • Bit_score: 169
  • Evalue 4.70e-39
nusG; putative transcription antitermination protein NusG; K05785 transcriptional antiterminator RfaH similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 163.0
  • Bit_score: 105
  • Evalue 1.90e-20

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGTGGTATGTCGCGGCGACGAAGGCCCGGGAAGAGGAACGCGCTCTCCGCAATCTGACGCAGCAGGGCTTTTGCGCCTTCCTGCCGATGATGGAGAGGACGGTGCGTCACGCGCGCAGAACCGCGTTGCGCACGATTCCCTTGTTCCCGGGCTATGTTTTTATCGACGGCACGCGCGCCGCCAGATGGCGTTCGGTAAACGGCACCAAGGGAATTACCCGCCTGATTGTTTTTTCCGACCGTCCCGCCATCGTCGAGCCCGGTTTCGTAGAAGAGCTGATAAAGCTTTCCCGCGCGGACGGCGTCATAGATTTAAAGCCGAGACTGTCGATCGGCGCGCGGGTGGAATTCGCCGCCGGTCCGATGGCGCAAAGAATAGGGCATTTGCTGAGCCTGGATGATCGCGGTCGCGCCACGGTGCTGCTGCGCTTCCTGCTAAGCGAGGTCCGGGTAAAGACCGACGCCGGCAACCTGCTGCCGGCCTAG
PROTEIN sequence
Length: 162
MWYVAATKAREEERALRNLTQQGFCAFLPMMERTVRHARRTALRTIPLFPGYVFIDGTRAARWRSVNGTKGITRLIVFSDRPAIVEPGFVEELIKLSRADGVIDLKPRLSIGARVEFAAGPMAQRIGHLLSLDDRGRATVLLRFLLSEVRVKTDAGNLLPA*