ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1043_12

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(11379..12263)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI000344933C similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 294.0
  • Bit_score: 432
  • Evalue 3.90e-118
  • rbh
amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 290.0
  • Bit_score: 265
  • Evalue 1.50e-68
ABC-type amino acid transport system, permease component protein {ECO:0000313|EMBL:ADJ64421.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 290.0
  • Bit_score: 265
  • Evalue 6.70e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGGAGGGGTTTGCGCAGCAGATCGTGAATGGGCTGTCGATAGGCTCGATCTATGCAGTGTTCGCGATTGGCTGCACGCTGATTTTCGGTGTGCTCAATATCATCAATCTGGCGCAAGGTGCCTTCCTCATGGTTGGTGCGTGCGCTGGATTGGAGGCTGCGAGGTTGGGATTCCCTCTACCGGTCGCCTTGTTGGTGGCTGCTGTTGGAGGAGGAATTCTGGGGGCTCTCTCCGAACAATTCATGTTTCGCCCGCTGCGCAAGGCGGGCGGACATCGCTGGATGGGTCTGGTCGCGAGTCTGGCGCTGGCGCGTCTGCTCGTGGGCGTGGCGCAGGAGATATTCGGCACCGAGGTTCAGGCTTATCCGCCAAGCTCGATCTCGACGATCATCTGGCAGATCGGCGGTGTGCGCATTCAGGCATTGCAGGTGATCATCATTCTGGCGGCGTTGCTGTTGATGCTGCTGTTTGCCTTCATCTTGCAGCGGACATCGATCGGTCGCGCTATTCGAACCGTGGCATTCAGCGAAGACGTCGCGCAGATCGTCGGGGTTCGGGTCGAAAGCGCCACGCTGGTGACGTTCTTTATTGCGGGCGCATTGGCTGGCGCTGCCGGCCTCCTGCTCGGCGTGTTGTTCAATGTCGTGTCCCCGTTCATGGGCGACAGTGCCTTGGTCAAGGGTCTCACGGTGATGATTCTCGGTGGCCTGGGGAATATTCCTGGAGCGGTCGCGGGCGGCTTCCTGCTCGGGCTTCTCGAGGTGTTCAGCATCGCTTACGTCAGTTCGGCCTTTCGTGACGCCATCGGTTTTGGCCTGATATTCCTGATCTTGCTGGTCAAGCCGACGGGCCTCTTCTCAGGATTTGAGGAGCGGCGTGCATGA
PROTEIN sequence
Length: 295
MEGFAQQIVNGLSIGSIYAVFAIGCTLIFGVLNIINLAQGAFLMVGACAGLEAARLGFPLPVALLVAAVGGGILGALSEQFMFRPLRKAGGHRWMGLVASLALARLLVGVAQEIFGTEVQAYPPSSISTIIWQIGGVRIQALQVIIILAALLLMLLFAFILQRTSIGRAIRTVAFSEDVAQIVGVRVESATLVTFFIAGALAGAAGLLLGVLFNVVSPFMGDSALVKGLTVMILGGLGNIPGAVAGGFLLGLLEVFSIAYVSSAFRDAIGFGLIFLILLVKPTGLFSGFEERRA*