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SCNpilot_cont_1000_bf_scaffold_918_19

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: 22197..22742

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PH46_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 180.0
  • Bit_score: 287
  • Evalue 9.50e-75
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS41977.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 180.0
  • Bit_score: 287
  • Evalue 1.30e-74
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 179.0
  • Bit_score: 283
  • Evalue 4.30e-74

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
GTGCGCGGACGTGACGACGAATGGACCGGCCTGATGCGGGCGGCGAATGGCGGCGATGCCGCCGCCTATCGGCGTCTCCTGGAGGCCGTCACGCCGGTTTTGCGCGCGGCGACCCGTCGCGGGCTGGTGCGCGCGGGCCAGCCGGCCGATCAATCCGAGGACATTGTGCAGGAAATTTTGCTGGCGGTGCATTTGAAGCGACAGACCTGGGACGCGACCGCGCCGTTCGCGCCTTGGCTGTTCGCGATCGCGCGCAACAAGCTGATCGATGCGCTGCGTCGTCGCGGCCGGCGGATCTTCGTCAACATCGACGATTTTTCCGAAACGATGGCGGCGCCGGCGGCGGGCGAAACGCTGTCTCCGGGCGAGGTCGCCACACATCTCGACGGATTGCCGTCGCGCCAACGCGACGTGCTGCGGTCGATCGCGGTGGACAGCGTCTCGATCAAGGAAACTGCCGCGCGGCTCTCGATGACCGAGGGCGCGGTGCGGGTGGCGTTGCATCGCGGCCTTGCCAGTCTTGCGGCGAAACTGCGGGAGCCATGA
PROTEIN sequence
Length: 182
VRGRDDEWTGLMRAANGGDAAAYRRLLEAVTPVLRAATRRGLVRAGQPADQSEDIVQEILLAVHLKRQTWDATAPFAPWLFAIARNKLIDALRRRGRRIFVNIDDFSETMAAPAAGETLSPGEVATHLDGLPSRQRDVLRSIAVDSVSIKETAARLSMTEGAVRVALHRGLASLAAKLREP*