ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1298_1

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(2..1885)

Top 3 Functional Annotations

Value Algorithm Source
nodulation protein n=1 Tax=Rhizobium loti RepID=UPI0003653A02 similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 628.0
  • Bit_score: 1045
  • Evalue 0.0
Multidrug resistance protein MdtC {ECO:0000313|EMBL:AID32201.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.3
  • Coverage: 628.0
  • Bit_score: 1042
  • Evalue 0.0
acriflavin resistance protein; K07789 RND superfamily, multidrug transport protein MdtC similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 628.0
  • Bit_score: 925
  • Evalue 7.40e-267

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1884
ATGAACCTTTCGGTCCCCTTCATCCGGCGGCCGGTAGCAACGACGCTGCTGACCCTCGGTGTGCTGATGGCCGGCCTGGTGGCCTTTCCACTGTTGCCCGTCGCGCCGCTGCCGGCGGTGGACTATCCAGTCATATCCGTCCAGGCGACGCTGCCGGGAGCGAGCCCGGAGGTCGTCGCCCAGACGGTGGCAAGCCCGTTGGAACGGCATCTCGGCCAGATCGCGGACGTCAACGAGATGACATCGTCGAGCAGCCTCGGCTCGACGCGCATCACATTGCAGTTCGGCCTCGACCGGGACATAGACGGGGCCGCGCGCGACGTGCAGGCCGCCATCAATGCCGCGCGCGCGGACCTGCCGACCGGCCTGCGTTCCAATCCAACCTATCGGAAGGTCAATCCGGCCGACGCGCCGATCCTCATCCTCGCACTCACGTCCGACACGTTGTCCAAGGGCCAGCTTTTCGACGCTGCAAGCACCGTGCTGGCGCAGAAGCTGTCGCAGGTAGACGGTATCGGCGAGGTGACCGTGGGCGGCAGTTCGCTGCCGGCCGTTCGGGTCGAACTGGTGCCCCAGGCGCTCTACAATTACGGCATCGGGCTGGAAGACGTGCGCGCCGCCCTCGCCTCGGCCAACGCCCACAGCCCGAAAGGCGCCATCGACGTCGGCGACCAGCGCTATCAGATTTATGCCAACGACCAGGCGACCGCCGCGAAGGACTATCGCTCGCTGATCGTGGCCTACCGCAACGGCGCGCCCGTCCGCCTGACCGATGTCGGCGAGATCACGGACTCGGTCGAGAATATTCGCAACGCCGGCCTCGCCAACGGCAAGCCTGCCGTGCTCATCATCCTCAACAGGTCCCCCAACGCCAACATCATAGCGGCGGTGGATCGGGTGAAGGCGCTCCTGCCGACGCTGCGCGCCTCGATCTCGCCTGCCATAGACCTCACTCTCGCATCCGACCGCTCGACCACCATCCGTGCATCGTTGTACGAAGTGGAGCAGGCCCTGATGATCGCCATCGGCCTCGTGATCCTGGTGGTTTTCGCCTTCCTGCGCGACCTGCGCTCGACACTGGTGCCGATCGTGGCGGTTCCGGTCTCGCTGGTCGGCACGCTTGGCGTCATGTACCTGCTGGGTTTCAGCATCGACAATCTGTCACTGATGGCACTCACCGTCGCCACCGGCTTCGTGGTCGACGACGCCATCGTGGTGCTCGAGAACATCGCCCGGCATATCTCCTCCGGCATGCGGCCCGTAGAAGCCGCAATCCTCGGCTCCCGCGAGGTCGGTTTCACGGTTCTCGCCATGAGCACCTCGCTGATCGCCGTATTCATACCCATCCTGCTCATGGGCGGCATCATCGGTCGCCTGTTCCGGGAGTTCGCCGTGACGCTTTCGGCCGCGATCCTGGTTTCGCTTGTCGTATCGCTGACGACCACGCCGATGATGTGTTCCATCCTGCTGCGCTCCGAACAAGGCCGGGAGCATGGCAGGCTCTATCGCTTCAGCGAACGGGTGTTCGACGCCATGCTCGGGGGCTACAGGCGTTCGCTTTCATGGGCGCTCGGCCACTCGCGCCTGGTCCTGGCGATCCTGGCTGCGACGCTGTGCCTGAATTTCTACCTCTATGTTGCTATTCCGAAAGGGTTTTTCCCGCAACAAGACACGGGGCGTCTTGTCGGCTCGATCCAGGCTGACCAGGCGATCTCGTTTCAGCTCATGTCGCAGAAGCTCGGCCAGTTCGCCGATATCGTGAGCCGGGACCCGGCCGTCGCGACGGCCGTCGGGTTCACTGGCGGCGGGCGGACCAATTCGGGCTTCATGTTCGTTTCGCTGAAGCCGCTTTCCGAACGCAAGATTTCAGCCGACCAGGTGATA
PROTEIN sequence
Length: 628
MNLSVPFIRRPVATTLLTLGVLMAGLVAFPLLPVAPLPAVDYPVISVQATLPGASPEVVAQTVASPLERHLGQIADVNEMTSSSSLGSTRITLQFGLDRDIDGAARDVQAAINAARADLPTGLRSNPTYRKVNPADAPILILALTSDTLSKGQLFDAASTVLAQKLSQVDGIGEVTVGGSSLPAVRVELVPQALYNYGIGLEDVRAALASANAHSPKGAIDVGDQRYQIYANDQATAAKDYRSLIVAYRNGAPVRLTDVGEITDSVENIRNAGLANGKPAVLIILNRSPNANIIAAVDRVKALLPTLRASISPAIDLTLASDRSTTIRASLYEVEQALMIAIGLVILVVFAFLRDLRSTLVPIVAVPVSLVGTLGVMYLLGFSIDNLSLMALTVATGFVVDDAIVVLENIARHISSGMRPVEAAILGSREVGFTVLAMSTSLIAVFIPILLMGGIIGRLFREFAVTLSAAILVSLVVSLTTTPMMCSILLRSEQGREHGRLYRFSERVFDAMLGGYRRSLSWALGHSRLVLAILAATLCLNFYLYVAIPKGFFPQQDTGRLVGSIQADQAISFQLMSQKLGQFADIVSRDPAVATAVGFTGGGRTNSGFMFVSLKPLSERKISADQVI