ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1191_3

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(4266..5633)

Top 3 Functional Annotations

Value Algorithm Source
HlyD family type I secretion membrane fusion protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PLJ8_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 64.2
  • Coverage: 450.0
  • Bit_score: 597
  • Evalue 1.40e-167
HlyD family type I secretion membrane fusion protein {ECO:0000313|EMBL:EKS41654.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.2
  • Coverage: 450.0
  • Bit_score: 597
  • Evalue 2.00e-167
Type I secretion membrane fusion protein, HlyD similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 441.0
  • Bit_score: 587
  • Evalue 4.60e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGAAGTTCCTTATCGAAGCAGTCAGGAGAAAAAGGGTCCAGGAACGGCCGTCCTGGGATTCGGATCTTCCGCGGTCGACGAAGGCTGCCACGCTCGGCGGGGTCCTGATCATTGCGTCCACCGTCATGGGCTTTGGCGTGTGGGGCAGCACGGCTCCGATCGCCGGTGCGGTGGTTGCCTCGGGCGTGTTCGTCGCCACGGGTGAGAACAAGACGATCCAGCATCTCGAGGGAGGCGTCATCCGCAAGATTGCCGTGCGGGAGGGAAACGTTGTCAAGGCCGGTCAGACATTGATCGAACTGGATCCGACGACGCCCAAGGCCGAACTGCGAAGGTTGCAGATCCGACAGAGTCGCCTTGTCGCAGAGGACACCCGCCTGCAGGCCGAAATTCACGAACAGGACGCAGTCAGCTTTCCCGACGACTTGACCGAAAAGGCCAGCGATCCGGAAGTCCTGGAGATTCTGAATACTCAGCGAATGACGCTTGTTGCCCGCCGCAACAATCTGAAGAGCGATATCGCCGCGGTCGAGGCGAGCATCAACGCGATCAAGGATCGCATCGAAGGTTCGAAGGTGCAGCTCGACAGCGTCAAGCGTCAGATACATCTCCTCGATGAGGATATCGATACGAAGCAGCACCTTCTCCAATCCGGACTGGTGAAGAAGCCGGATGTCTTGCTGTTACTGCGGACCAAGGCGAACCTAGAAGGCGAAGTTGGGAGGATCATGGCGGACATTGGTGACGCCAAGGAACGAATCGCTCGTTCCCAGGAGCAGATCACCGGATTACGAAGGGACGCGGTGAAGAAGGCGGTCGATCAGTTGCGCGAGGTGCGCAGTGAGTTGGCAGACGTCAACGAGCGGGTTCGCACCGCTCAGGCTGTGGTCGATCGACTCAACATAGTGGCTCCAGTCGAAGGTATCGTAGTCAAGATGCGGTATCACACCGAGGGCGGGGTCGTGGAACCCGGCAAGCCGATCATGGAGATATTGCCGCTCAACGCCGAACTTATCATCGAGGCGCGCGTCAGACCGCAGGATATCGATAGCGTGAGGCGAGGTCAGCATGCGATGGTGCGGCTTACCGCGCTCAGCCAGCGCGTTACACCGATGATCGGCGGCGATGTCATCTATCTTTCGGCGGATTCCCTGCCGGATGAGCGCAAGTCCATGCAGTTGGGCCCTACGGACGTTTATGTCGTGAGGGTCCGCTTGAATGCCGCGGAAGCTGCGAGCCTGCCGAATTTCAGCCCGACGCCAGGAATGCCGGTTGAAGTCTTCATCAAGACTTCGGAGCGGACTTTCCTTCAGTACATCACCAAGCCGCTTGAAGACAGCATGACACGAGCATTCCGAGAGCGATAA
PROTEIN sequence
Length: 456
MKFLIEAVRRKRVQERPSWDSDLPRSTKAATLGGVLIIASTVMGFGVWGSTAPIAGAVVASGVFVATGENKTIQHLEGGVIRKIAVREGNVVKAGQTLIELDPTTPKAELRRLQIRQSRLVAEDTRLQAEIHEQDAVSFPDDLTEKASDPEVLEILNTQRMTLVARRNNLKSDIAAVEASINAIKDRIEGSKVQLDSVKRQIHLLDEDIDTKQHLLQSGLVKKPDVLLLLRTKANLEGEVGRIMADIGDAKERIARSQEQITGLRRDAVKKAVDQLREVRSELADVNERVRTAQAVVDRLNIVAPVEGIVVKMRYHTEGGVVEPGKPIMEILPLNAELIIEARVRPQDIDSVRRGQHAMVRLTALSQRVTPMIGGDVIYLSADSLPDERKSMQLGPTDVYVVRVRLNAAEAASLPNFSPTPGMPVEVFIKTSERTFLQYITKPLEDSMTRAFRER*