ggKbase home page

SCNpilot_cont_1000_bf_scaffold_2089_4

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(2888..3127)

Top 3 Functional Annotations

Value Algorithm Source
Transcription activator, effector binding n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21CU5_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 53.0
  • Bit_score: 109
  • Evalue 1.60e-21
transcription activator, effector binding similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 53.0
  • Bit_score: 109
  • Evalue 4.90e-22
Transcription activator, effector binding {ECO:0000313|EMBL:ABD85791.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 53.0
  • Bit_score: 109
  • Evalue 2.20e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGGAGCCGAAGACGGTGCTGATCTTCACGGGCAGCGCCACCTGGGATTCGGCGTTCGAAAGCCTGATGGATGCCTGCGGCTCCTACGACAACATGGACAACACCTACGAGGCGATCACCAATCACCTCGACGACAAGAAGCTGGAAGCCAAGGATCTGTTCGTCGAGGAATACATCACCGACCCGCTCAAGACGGCGGAAGACAAGCTGGTGATCAATGTCTACGTTCCACTGAAGTGA
PROTEIN sequence
Length: 80
MEPKTVLIFTGSATWDSAFESLMDACGSYDNMDNTYEAITNHLDDKKLEAKDLFVEEYITDPLKTAEDKLVINVYVPLK*