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SCNpilot_cont_1000_bf_scaffold_1216_28

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: 27097..27648

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20Z80_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 182.0
  • Bit_score: 346
  • Evalue 1.30e-92
  • rbh
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 182.0
  • Bit_score: 346
  • Evalue 4.20e-93
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 182.0
  • Bit_score: 346
  • Evalue 1.90e-92

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
ATGCCTCTCACCAATGAGCTTCGCGACGACATCCTGGCGTCGGTTCCTAGCCTGCGCGCCTTTGCGATTTCCCTGAGCGGCAACGGCGATCGGGCCGATGACCTTGTGCAGGAGACGCTGCTGCGCGCGCTCGCCAACATCGATTCCTTTCAACCCGGCTCGAACCTGCCGGCGTGGCTGTTCACCATCCTTCGCAACCTGTTTCGTTCGGACTACCGCAAGCGGCGCCGCGAAGTAGAGGATGCCGAGGGCAACTACGCCAAGACGCTGAAGTCGCAGCCGGGTCAGAACGCGCACCTCGAGTTCGAGGAGTTTCGTGCGGCGCTCGACAAGTTGCCGCAGGACCAGCGGGAAGCGCTCATTCTGGTCGGCGCCTCGGGCTTTTCCTACGAAGACGCCGCCGCCATTTGCGGCTGCGCCGTCGGCACCATCAAGAGCCGCGTCAATCGCGCGCGGACCAAGCTCAGCGCGCTGCTCTATGTCGATGGCGCAGAGGATTTCGGGCCGGACGACACCGTCCGCGCCGTGATCGGCGGCAGCGGCAACGGCTAG
PROTEIN sequence
Length: 184
MPLTNELRDDILASVPSLRAFAISLSGNGDRADDLVQETLLRALANIDSFQPGSNLPAWLFTILRNLFRSDYRKRRREVEDAEGNYAKTLKSQPGQNAHLEFEEFRAALDKLPQDQREALILVGASGFSYEDAAAICGCAVGTIKSRVNRARTKLSALLYVDGAEDFGPDDTVRAVIGGSGNG*