ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1648_17

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(15301..16800)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D06596 related cluster n=1 Tax=unknown RepID=UPI0003D06596 similarity UNIREF
DB: UNIREF100
  • Identity: 70.3
  • Coverage: 508.0
  • Bit_score: 706
  • Evalue 2.30e-200
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 508.0
  • Bit_score: 707
  • Evalue 1.10e-200
RNA polymerase sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 508.0
  • Bit_score: 685
  • Evalue 1.00e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGGGGCTTTCGGCCAGGCTGCAGCTGAAGCAGTCGCAATCGCTGGTGATGACGCCGCAACTCATGCAGTCGATCCGACTGCTGCAGTTGAGCCATGCCGATCTGGAGCTTTTCATCGACGATGAGATCGAGCGCAATCCGCTGATCGAGCGCGGTGCCGACGATGATGTGCCGGCGGGTCCCGAGGTGGCCGAAGATGGGATTGAGGGCGAGCCTGAGCCCGAATGGAGCGCGGCTTCCATGTCGGATCGGCTCGATACGTCGATGGAAAACGTCTTTCCCGACGATCCCGGCATGCGCGATCCCATCGGTCCCGATCTGGCGGCGCAGTGGAAATCGGCCCATGACGGAGGCGGCCGCGCGCTCGAGAGCGACGGCTTCAACTTGGAGGAGGTGGCGGCCGCTCCGGTGACGCTGCGTGACCATGTGCGCGAGCAGATCGCATTTGCCTTCGCCGATCCGGTGCAACGCGCCGTCGCCGTCGAATTGGCCGACGGGCTGGACGATGCGGGTTATCTGCGCACCGACACCGGAGAGATCGCCGAAAGGCTGGGCATCGGCGGGGATGTCGTCGCAGCGGCGCTTTCCGAGTGCCAGACTTTCGACCCGCCCGGCATCTTCGCGCGCGATCTCTCCGAATGCCTGGCGCTCCAGCTTCGCGCGCGCGACCGGCTCGATCCGGCGATGGAAGCGCTCCTCCACAATCTGGAACTCCTGTCGCGCCGCGATTTTCAAGCGCTGACGCGGCTGTGCGGCGTCGGCCAGGAAGATCTGCTGGACATGCTGGCCGAGATCCGTGCGCTCGATCCGAAGCCGGGTATGGCTTTCGCCGGCGGCACCGCCGACGTGATCGTGCCGGACGTTCTTGTCCGCCCGGCGCCGGACGGAAGCTGGCAGGTGGAACTCAACCCCGATACGCTGCCGCGCGTACTGGTCGACAACGCCTATTACGCGCGGGTCAGTTCGGCGACGAAGGATGCGGCCGAGAAGGAATTCCTGACGGAATGCCTGCAAAGCGCGACCTGGCTGAAACGCAGCCTCGATCAGCGTGCCCGCACGATCCTCAAGGTTGCCTCCGAGATCGTCCGACAGCAGGACGCCTTCCTTGTCCACGGCGTGCGCCATCTGCGGCCGCTCAACATGAAAGGCATCGCCGAAGCGATCGGCATGCATGAATCGACGGTCAGCCGCGTGGCGGCCAACAAATACATGCTGACCCCGCGCGGCGTCTTCGAATTGCGCTATTTCTTCACGCCGGCGATTGCCGGGGCGGGCGCGGCCGACGCGCATTCGTCGGAAGCGGTCCGCGATCGCATCCGGCAACTCATCGAACAGGAGGAACCGGCCGATGTGCTCTCCGACGATTCGATTGTGGATAAGCTCAGGGAAAGCGGCGTCGATATCGCCCGAAGGACGGTCGCCAAGTATCGGGAAGGAATGAATATTCCCTCTTCCGTCGAGCGCCGCCGCGAGAAGAAGGCGCTTGCCGCGCTCGGCTGA
PROTEIN sequence
Length: 500
MGLSARLQLKQSQSLVMTPQLMQSIRLLQLSHADLELFIDDEIERNPLIERGADDDVPAGPEVAEDGIEGEPEPEWSAASMSDRLDTSMENVFPDDPGMRDPIGPDLAAQWKSAHDGGGRALESDGFNLEEVAAAPVTLRDHVREQIAFAFADPVQRAVAVELADGLDDAGYLRTDTGEIAERLGIGGDVVAAALSECQTFDPPGIFARDLSECLALQLRARDRLDPAMEALLHNLELLSRRDFQALTRLCGVGQEDLLDMLAEIRALDPKPGMAFAGGTADVIVPDVLVRPAPDGSWQVELNPDTLPRVLVDNAYYARVSSATKDAAEKEFLTECLQSATWLKRSLDQRARTILKVASEIVRQQDAFLVHGVRHLRPLNMKGIAEAIGMHESTVSRVAANKYMLTPRGVFELRYFFTPAIAGAGAADAHSSEAVRDRIRQLIEQEEPADVLSDDSIVDKLRESGVDIARRTVAKYREGMNIPSSVERRREKKALAALG*