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SCNpilot_cont_1000_bf_scaffold_1421_17

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: 13511..13855

Top 3 Functional Annotations

Value Algorithm Source
Homoprotocatechuate degradation operon regulator, HpaR n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IC67_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 111.0
  • Bit_score: 131
  • Evalue 5.50e-28
Transcriptional regulator {ECO:0000313|EMBL:KJC49358.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 111.0
  • Bit_score: 137
  • Evalue 1.40e-29
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 107.0
  • Bit_score: 125
  • Evalue 9.50e-27

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Taxonomy

Bradyrhizobium sp. LTSP885 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
TTGACATCCTACGAGAGCATCGAGGTGTCCGAACTGGCGCGCGTCGCCTATCTGCTTGGGCCGAGCCTGTCGCGGATCCTGCGCGATCTTGAGGAGCGGCGGCTGATCGAACGGCGCACCGTCAAGGCCGACCTGCGGCGAGGCATCGTTTCGATTTCCGACAAGGGATTGCGTTTGATCGAGGCCGTCGCGCCATCGTCGGAGGCGATCTATGCGGAGATCACGCGGCGCTATGGCGCCGATCAACTCGCTGCGTTGCAGGATTTGCTGCGTGCCCTCGAAACAAGCCTGCACGACATGCCGTTGCCCGGCCAGGGCGATCCTCAGAACGACGCATCCCTGTAG
PROTEIN sequence
Length: 115
LTSYESIEVSELARVAYLLGPSLSRILRDLEERRLIERRTVKADLRRGIVSISDKGLRLIEAVAPSSEAIYAEITRRYGADQLAALQDLLRALETSLHDMPLPGQGDPQNDASL*