ggKbase home page

SCNpilot_cont_1000_bf_scaffold_2416_23

Organism: SCNpilot_cont_1000_bf_UNK

megabin RP 53 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 21 / 38 MC: 17
Location: comp(24706..25155)

Top 3 Functional Annotations

Value Algorithm Source
Biopolymer transport protein ExbD/TolR n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20X61_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 149.0
  • Bit_score: 246
  • Evalue 1.50e-62
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 149.0
  • Bit_score: 246
  • Evalue 4.80e-63
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ABD90275.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 149.0
  • Bit_score: 246
  • Evalue 2.10e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGGGTATGAATATCGCGGGAGCATCGGGGGGCGGACGCGGCCGGCGGCGGCGCGCGGCGCCGATGGCCGAAATCAACGTCACGCCGATGGTCGACGTCATGCTGGTGCTGCTCATCATCTTCATGGTGTCTGCGCCGCTTCTGACGGTCGGCGTTCCGCTCGATCTGCCGCAGACCCAGGCCAAAAGCCTCGATCAGGACAAGAACCCCCTGACGCTGTCGGTGAATCTCAAGGGTCAGATCTTTCTCAACGACACCGAAATCGCGGTCGACGAACTGGTGCCGAAATTGAAAGCCATTACCGAGGCGCGCGCCGGTATGGACGAACGCATTTTTGTACGCGGCGACAAGAAGGTCGACTACGGCACCGTTATGAAAGTGATGGGACGGTTGTCGCAGGCTGGCTTCCGTCACGTCGCGCTGGTGACCGAGGTGGAGCAAGGAAACTGA
PROTEIN sequence
Length: 150
MGMNIAGASGGGRGRRRRAAPMAEINVTPMVDVMLVLLIIFMVSAPLLTVGVPLDLPQTQAKSLDQDKNPLTLSVNLKGQIFLNDTEIAVDELVPKLKAITEARAGMDERIFVRGDKKVDYGTVMKVMGRLSQAGFRHVALVTEVEQGN*