ggKbase home page

SCNpilot_cont_1000_p_scaffold_6412_8

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(5619..6785)

Top 3 Functional Annotations

Value Algorithm Source
P-type conjugative transfer protein TrbL n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SDQ4_CITFR similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 427.0
  • Bit_score: 309
  • Evalue 6.50e-81
Uncharacterized protein {ECO:0000313|EMBL:KIO48644.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 388.0
  • Bit_score: 360
  • Evalue 3.40e-96
trbL; P-type conjugative transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 393.0
  • Bit_score: 293
  • Evalue 8.90e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGTTCGGCATAGCAATCGAGTTGGGGAAAACCATAGGGGGCATAGGTCTGGTCAATCCGGTGTCAGCCTTCATTGTTTCCCTATCCACAATCCTGGTTGTGATGTGTTTCACGTTCATAGCCGCGTTCATGATGGTTACGTTAATAGAGTCTTTCATTGTGATCAATGCCGGAGTGTTCTTCATGGCATTTGGGGGATCGCAATGGACGCGGGAGTACGCAATGGCAATGCTGCGCTATTCAGTATCGGTCGGTGCAAAGCTATTCGTGCTGACGCTGATTGTCGGGTTGATTATGGTATCCGCGCGCCAATGGCAAGCAGCCTATACGCAGGACGAAACAAGTACTCTGACGCTGGTCGGCCTGTCGTTCGTGTGCGCTTATCTATCCAAAACCCTGCCGGACATGATCCAGGCACTTATCAATGGTGTGTCTCCTGGTGGCGGGGCGACGTTGGGCGGCATGGCGGCAGCTGGAATGGCAGGAGTAGCAGCGGGAGCGGCGGCGATGTCGGCAACCATGGGTAGCGGGGCATTAGGCGGCGCTGGAAAGGGTGTTTCCGACATGATCAGATCCAGTTTTTCAGGAATGGGCGGTTCAAGTGGTGGTGGCAGTGGCAGTTCCGTTTCAAGTTTCATGGGTTCCGGGGGGGCATCCAGCGGCGGCGGGTACGGTAGCAGCGCGCGCAGTCCTGGGCCGTCTCCCCGGACAGGTGGAGGAGGGTACAGCCAGGCGACCGGCACACCATCCAGCGCACAGCCCACGGGTCAAACCGCTTCAAGCAGTCAATCGACCACATCAAGCAGCAATGGTGGTGAACCGGCTACATCCGCAGCATCGCCAGCAAGCGCGGCAGGGAAGATACATGCCGGCGCTCACATGGCGACCGAAGCAGCGGTGCGCAGTGTTGGCATCATGGGGTCGTTATCTGTTCCGGGCATGGACAGCGCCAGCGGGGTTTCCATTGGCCCGCCCCCAAGCCCGCCCGACCTGACCGGTCTTCCAGGGGAAACCCCTGAAAACATCATTCGTCCCGAATCTGCATCGCCTTCGATGAGCGAGGAATTGGGGAATTCACCAGAAGCGACAGCAAAGCCGCCAGAAGCAGCAGTCGATACCATGTCGAGCATACAGGATGCGCTCAATAACAGAGGGAAACCATTATGA
PROTEIN sequence
Length: 389
MFGIAIELGKTIGGIGLVNPVSAFIVSLSTILVVMCFTFIAAFMMVTLIESFIVINAGVFFMAFGGSQWTREYAMAMLRYSVSVGAKLFVLTLIVGLIMVSARQWQAAYTQDETSTLTLVGLSFVCAYLSKTLPDMIQALINGVSPGGGATLGGMAAAGMAGVAAGAAAMSATMGSGALGGAGKGVSDMIRSSFSGMGGSSGGGSGSSVSSFMGSGGASSGGGYGSSARSPGPSPRTGGGGYSQATGTPSSAQPTGQTASSSQSTTSSSNGGEPATSAASPASAAGKIHAGAHMATEAAVRSVGIMGSLSVPGMDSASGVSIGPPPSPPDLTGLPGETPENIIRPESASPSMSEELGNSPEATAKPPEAAVDTMSSIQDALNNRGKPL*