ggKbase home page

SCNpilot_cont_1000_p_scaffold_7789_12

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(7473..7850)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S6 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DW34_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 125.0
  • Bit_score: 225
  • Evalue 3.10e-56
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 125.0
  • Bit_score: 225
  • Evalue 4.30e-56
rpsF; 30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 similarity KEGG
DB: KEGG
  • Identity: 83.2
  • Coverage: 125.0
  • Bit_score: 224
  • Evalue 2.10e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCGACATTACGAAGTGGTTTTTATCGTGCACCCGGATCAGAGCGAGCAGGTGCCCGCAATGATCGAACGCTATCGAGGGATGGTAACGGCAAGAAATGGCCGGATACATCGCCTGGAAGACTGGGGACGCCGGCAGCTTACCTATCTGATCCAGAAAGTCCACAAGGCGCATTACGTATTGATGAACATCGAATGCGATCAGGAAACCCTGGATGAGCTGGATCACGCATTCAAGTTCAGCGACGCCATATTGCGTCATCTCACCATAAAGATGGACGGACCGGTCACCAGTCCCTCGCCGATGATGCGCGAAGAAAAATCCAGGCCGGCCCCCAGCACCACGGAGGATAGCCGGGAAACGACTCTCGCCACCTAG
PROTEIN sequence
Length: 126
MRHYEVVFIVHPDQSEQVPAMIERYRGMVTARNGRIHRLEDWGRRQLTYLIQKVHKAHYVLMNIECDQETLDELDHAFKFSDAILRHLTIKMDGPVTSPSPMMREEKSRPAPSTTEDSRETTLAT*