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SCNpilot_cont_1000_p_scaffold_7789_14

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(8511..10685)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 722.0
  • Bit_score: 1230
  • Evalue 0.0
VacB/RNase II family 3'-5' exoribonuclease (EC:3.1.13.1); K12573 ribonuclease R [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 724.0
  • Bit_score: 1207
  • Evalue 0.0
  • rbh
Ribonuclease R n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLJ3_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 722.0
  • Bit_score: 1230
  • Evalue 0.0
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2175
TTGTCAATGAACAGGAAACGCGGACTTCGGCAGCTTGATCCTTATCTCGAACGCGAGAAAGAGCGTTACGGCCATGCTTTGCCCAGCCGGGAGTTCATCCTGCAAGTACTCAAGGATCAGGGTGTTCCCGTTGGCGAGGAAATATTGCAACAGCTTCTCGCCATCACGGAAAAGGAAAGCGAGCTTTTCAGCCGGCGGGTATCCGCCATGGAACGCGAAGGCCAGATCATGCGCAATCGCAAGGGCGATATCTGCGTTGTGGAGAAACTGGATCTCGTCAAGGGCACGGTCCAGGGGCACGCGGACGGGTTCGGATTTCTGATTCCCGATGACGGCGGTCCAGACTTGTTCCTGAGCGCCAAGGAAATGCGCAAAGTGCTGCATGGCGATCGTGCCATGGTGCGCGAGATCGGTATCGACCGCCGCGGGCGCAAGGAAGGGGCCATCGTGGAGGTGCTGGAGCATGCGGTGGCCCGGCTGGTGGGAAGGTTGCACGACGATCATGGCATCCTGTTCGTGGAAGCGGAAAACAGGCGCATCAGCCAAGATATCCTGATACCCAGGGGAGAGTCCATGGGCGCGAAAGCGGGACAGGTGGTCATGGTCGAGCTCATCCAGCAGCCAAGCAAGAGTGCCCAGCCTATAGGCCGCATTTTCGAGATTCTCGGGAATTACGCCGCCCCCGGCATGGAAATCGAAATTGCGCTGCGTAAACATGAATTACCCTATCAATTTCCGCCGCAGGTGAAAAAGCTTTCGGGGAAATTTCCGTCTGACGTCCTGCAATCCGAGCTTGAGGGGCGCATCGATATCCGCCATCTGCCGCTGGTGACGATAGACGGCGAGAGTGCACGGGATTTCGACGATGCGGTGTATTGCGAGCGCGATGGAACGGAATATAAATTATATGTCGCCATCGCGGATGTCAGCCATTATGTGCATCCTGGCGATGCGCTGGACCAGGAGGCATTGAATCGGGGTAATTCCGTGTATTTCCCGCGGCGCGTGATTCCGATGCTGCCGGAAGTGCTGTCCAACGGACTGTGCTCGCTCAACCCCCAGGTGGCGCGCTTGTGCGTGGTATGCGAAATGAGCCTCGATTCGGCAGGTAATTTTCGCAATTATGAATTTTATCCTGCAGTGATGTATTCCCATGCCCGGCTGACCTATACCGAGGTGGCGGCGATGCTCGAGAATTCTCGTGGAGAAGAAGCCAGGCGGCACCGCAAGCTGCTTCCCCACATACGGCTGCTCAACAGACTGTTCAAGATTCTGTTGAAAGCAAGAAAGAAACGAGGCGCCATCGATTTCGAAACCATCGAAACGCAGATGGTTTTCAATGACGAGGGAAAAATCGACTGCATTCTGCCGGTCAAGCGCAATGACGCCCATCGTTTGATCGAAGAATGCATGCTTGCAGCCAATGTCTGCGCATCGGATTTTCTGAAGAAACACGAACAGCCCACGCTGTATCGCATCCACGAGGGTCCGACCCCGGAAAAGCTCGTGGCATTGCGCGACTTTCTCAAGGAATTCGGCTTGCAGCTTGGCGGTGGCGATCGGCCGAGCGCGAAGGATTATGCGAAGTCGCTCGAAAAAATAAGGGATCGGCCCGATGCCCAGCTGTTGCAGACGGTGATGCTGCGATCGTTGCGCCAGGCGGTTTACAGTCCGGATAACGTCGGTCACTTTGGCCTTGCTTATGAGTCCTATACTCACTTTACTTCGCCTATCAGGCGGTACCCCGATCTGCTCGTCCACCGCGCCATCAAGGCGGTGCTCAGGAATAAGAGATATTCTCCGGGGGACTGGCACGGGCTGGGCGTGCATTGTTCCCAGACAGAGCGCCGTGCAGACGATGCGACCCGGGACGTGGAGTCATGGCTCAAGTGCTATTACATGCAGGACAAAATCGGAGAGGATTTTTCGGGAGTCATCAGCGGGGTGACGGGCTTCGGCCTTTTCGTCGCCCTGGATGGAATATATGTGGAAGGATTGGTGCATATTTCAGAGTTGCCCAGCGATTATTTTCATTTCGATTCCGCCAAGCACATGCTGTTGGGGGAGCGCAGCGGAAAGCGTTATCGCCTGGGTGACAGGGTCAGAGTCCGGCTGGTGAATGTCGATCTGGAGTCCAGCAAGATCGATTTCGTGCTGGCCGGAGAGGTCGAATAA
PROTEIN sequence
Length: 725
LSMNRKRGLRQLDPYLEREKERYGHALPSREFILQVLKDQGVPVGEEILQQLLAITEKESELFSRRVSAMEREGQIMRNRKGDICVVEKLDLVKGTVQGHADGFGFLIPDDGGPDLFLSAKEMRKVLHGDRAMVREIGIDRRGRKEGAIVEVLEHAVARLVGRLHDDHGILFVEAENRRISQDILIPRGESMGAKAGQVVMVELIQQPSKSAQPIGRIFEILGNYAAPGMEIEIALRKHELPYQFPPQVKKLSGKFPSDVLQSELEGRIDIRHLPLVTIDGESARDFDDAVYCERDGTEYKLYVAIADVSHYVHPGDALDQEALNRGNSVYFPRRVIPMLPEVLSNGLCSLNPQVARLCVVCEMSLDSAGNFRNYEFYPAVMYSHARLTYTEVAAMLENSRGEEARRHRKLLPHIRLLNRLFKILLKARKKRGAIDFETIETQMVFNDEGKIDCILPVKRNDAHRLIEECMLAANVCASDFLKKHEQPTLYRIHEGPTPEKLVALRDFLKEFGLQLGGGDRPSAKDYAKSLEKIRDRPDAQLLQTVMLRSLRQAVYSPDNVGHFGLAYESYTHFTSPIRRYPDLLVHRAIKAVLRNKRYSPGDWHGLGVHCSQTERRADDATRDVESWLKCYYMQDKIGEDFSGVISGVTGFGLFVALDGIYVEGLVHISELPSDYFHFDSAKHMLLGERSGKRYRLGDRVRVRLVNVDLESSKIDFVLAGEVE*