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SCNpilot_cont_1000_p_scaffold_8467_8

Organism: SCNpilot_cont_1000_p_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: 3876..4181

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer protein TrbD n=1 Tax=uncultured bacterium RepID=U3LPE8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 101.0
  • Bit_score: 115
  • Evalue 2.80e-23
Conjugal transfer protein TrbD {ECO:0000313|EMBL:KIO48648.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 101.0
  • Bit_score: 129
  • Evalue 2.60e-27
conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 101.0
  • Bit_score: 103
  • Evalue 4.50e-20

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGAGCGAGCTCAGGAGAATTCCATTTCATCGAGCGCTGCATCGCTCCAACCTGATATTGGGAGGGGAAAGGGAGTTGATGATTTTCTGCCTGTTCATAACCGGCATGCTGATGATTACTTCCATGAATACCGTGTCGTTTTTGGTTGGAGCGGTGTTCGGCCTGGTTTCAGTAACTGGCCTTCGGGCAATGGCAAAGGCCGATCCAATAATGAGCAAGGTATATCGTCGGCAAGTGATGTATCGGGATTATTACCCCACATATTCCCGCCCTTACCGGGTAGCCAAGTCATCGAGGGTTTATTAA
PROTEIN sequence
Length: 102
MSELRRIPFHRALHRSNLILGGERELMIFCLFITGMLMITSMNTVSFLVGAVFGLVSVTGLRAMAKADPIMSKVYRRQVMYRDYYPTYSRPYRVAKSSRVY*