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SCNpilot_cont_1000_bf_scaffold_572_14

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(13396..13992)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE3A similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 195.0
  • Bit_score: 227
  • Evalue 1.70e-56
Transcriptional regulator {ECO:0000313|EMBL:EXG79215.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 185.0
  • Bit_score: 244
  • Evalue 1.40e-61
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 188.0
  • Bit_score: 127
  • Evalue 5.60e-27

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Taxonomy

Cryptosporangium arvum → Cryptosporangium → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 597
GTGTCAAGTTTAGGCGGCCGGACGCTGAGCGCGGAGGACAAGCGCGACCGGCTGCTCGACGTCGCCGAGGCGGCCTTCTGCGCACACGGCTACGACGGCACCACGATCGCCGTCCTCGCCGCCGAGGCCGGGGTGACCCGCCCGACCGTCTACGCGTACTTCGCCTCCAAGGACGACGTCTTCCGCGCCGTCGCCGACCGGGTGCGCCGTGAGTTCCTGGAGCTGCAGGAACGGGCCGACACCAGCTCCCCCGAGCGCACGGCTCGTGAGGCGGTGGCCGGCTACCTCGCCGCGTGGGCCCGCCACCACGGGATGCTGACGGTGATCGCCCACCAGGCCCTCGCCGACCCGGGCGTGCGGACGCTGCGCGACGAGATCCTCGCCCGTGCCGAGCGGCGCAACACCCGGTTCGTCGAGCGGTTGACGGCGGAGGGGCTCGCCGATCCCGCCCTGCCACCGGCCGACCTCTCCCGTGCCGTGACCGGCATCGTCGCCCGGGCGGCGGAGGTCGTCGCGGACGACCCGCGGCAGCTCGCGACGCTCGCCCGGCGGATCGGCGACGCCTACCTGAGGCTCGCCGGCATCGCGGCGGCCTGA
PROTEIN sequence
Length: 199
VSSLGGRTLSAEDKRDRLLDVAEAAFCAHGYDGTTIAVLAAEAGVTRPTVYAYFASKDDVFRAVADRVRREFLELQERADTSSPERTAREAVAGYLAAWARHHGMLTVIAHQALADPGVRTLRDEILARAERRNTRFVERLTAEGLADPALPPADLSRAVTGIVARAAEVVADDPRQLATLARRIGDAYLRLAGIAAA*