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SCNpilot_cont_1000_bf_scaffold_715_23

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(20325..21230)

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WQ17_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 301.0
  • Bit_score: 344
  • Evalue 8.30e-92
  • rbh
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 301.0
  • Bit_score: 344
  • Evalue 2.60e-92
  • rbh
Integrase family protein {ECO:0000313|EMBL:ACU35073.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 301.0
  • Bit_score: 344
  • Evalue 1.20e-91

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 906
GTGGTCTGGCTGCGCGAACTCGACGAGTCCGACCGCGCGATCCGCACGAAGATCACCTATCGCGACGTCTGGACCCGTCACGTCGAGCCGGCGGTGGGCGCTCTGCTGCTCCGTGACGCTCGGGTCTCCCGGATCGACGCGGTCATCCGGCAACTGCGCGAGCAGTCCGGGCCCGGCCCGGCCAAGCACGCGAAGGTCATCCTCTCGGGCGTCCTCGGTCTGGCCGTCCGCCACGACGCACTCGACGCCAACCCGGTTCGCGACCTCACGCCGGCGCGCAGCAAGCGCAAGCCGCGCTCCCTCGTGCTCACCGAAGCGAGCTGGGCCGGCCTCCGCGCGCACCTCGCCGCGTCCGACGCCGCAGGCACTAACGACCTGCGCGACGTCGCCGACGTCCTGTCCGGGCTCGGGTGTCGAATCGGCGAGCTGCTCGCGCTCGACTGGCCGCGGGTCGACGACGTCGCCGGAACGATCGCGATCGAGGGCACCGTGATCCGGGTGCCCGGTACGGGCCTGATCGTTCAGCCCCACACCAAGTCCGACGCCGGCATGCGGACGATCGAGCCGCCGGCCTGGGTGATCGCGCTCCCGCGTAAGCGGCACGCCAACTCGCACGGCCCCTGGGTGTTCCCGTCGACGCGCGGCACGCTCCGCGATCCGGACAACACCCGGAAGCGGCTGCGCGAGGTCGTCGCAGGCACCGAGTGGGAGGGCCTGCACCCGCACGCCTTCCGGCACCTCGTCGCGACCCGGCTCGACGCTGCCGGCCTGAGCGCGCGGGAGATCGCCGACTACCTCGGGCACGAGCGCATCTCGATGACCCAGGACGTCTACATGTCGCACAAGTCCACGGGGGCCGGCGCCAGTACCGCGCTCGACGCGTTCGGACCGGAAAGCGCGGGGTAA
PROTEIN sequence
Length: 302
VVWLRELDESDRAIRTKITYRDVWTRHVEPAVGALLLRDARVSRIDAVIRQLREQSGPGPAKHAKVILSGVLGLAVRHDALDANPVRDLTPARSKRKPRSLVLTEASWAGLRAHLAASDAAGTNDLRDVADVLSGLGCRIGELLALDWPRVDDVAGTIAIEGTVIRVPGTGLIVQPHTKSDAGMRTIEPPAWVIALPRKRHANSHGPWVFPSTRGTLRDPDNTRKRLREVVAGTEWEGLHPHAFRHLVATRLDAAGLSAREIADYLGHERISMTQDVYMSHKSTGAGASTALDAFGPESAG*