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SCNpilot_cont_1000_bf_scaffold_731_16

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 16049..17269

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6H7_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 404.0
  • Bit_score: 332
  • Evalue 7.50e-88
transposase IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 404.0
  • Bit_score: 332
  • Evalue 2.40e-88
Transposase IS4 family protein {ECO:0000313|EMBL:AEA28871.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 404.0
  • Bit_score: 332
  • Evalue 1.10e-87

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1221
ATGGGTGGACATGGCGGTCGCGCTCGCCGACGGCGCGACGACGATCTCCGAAGTCGCGGTGCTGGCGGACCAGGCTTCGCTGTTCGGGTCCGTGGCGCGGACTCGACCTACTGGCGGTTGCTCGATCAGCTCGACACCGCACGGCTGGGCTCGGTGGCGCAGGCTCGGGCCGGGGCGCGGGAGGTCGTCTGGGCGCAGCGCGCGGAGCTGACCGGTGAGTCGTTCCCGCCGGCTCCGGCCGGCGGCCGTGACCTGCCTGGGCTGGTAATCGACCTGGACGCGTCGGTCGTGGTCTGTCACGGCGAGAAGGAGTGCGCGGCGCCGACGTTCAAAAGTCGTTCGGGTTCCATCCGATGCTGGCGTTCTGCGGCAACACCGGCGAGTTCCTCGCCTCCACGCTGCGCCGCGGGAACGCGGGCAGCAACACCGCCGCCGACCACGTCACCGTCCTGGCAGCAGCGCGCGCTGCTGCCCGACCATCACCGGCACGGCACCCCGATCCTGGTCCGGGCCGATCCCCCCGGCTGCACGCGAGAGTTCTTCGCCCACATCCGCATCCGCCGCGACGAATCGGTGAGCTGCGAGTTCTCGGTCGGCTGGCAATCCGAGGCGGACCGCGATCGCCACGGTTGCGAAGACGGTGTGGACCGACGCGATCGACGCCGACGGCGGGCACCGCGACGGCGGCGCCCTGGCCGAGATCACCCGTGTGCGTCCCGCCCGATCGCTGACCGGCTACCCCCATCGGGAACTCGGTTGATCGTGCGTCGGGAACGTCCGCATCCCGCGGCTCAGCTCGACGCCTTCGAAGAGCGAGATGGCTGGCGCTACACCGCCTTCGCCACCGACACGAGGTACGGGCAACTCGCCAACCTCGACGCCCGGCACCGCGCCCACGCCGGGGTCGAGGGCCGGATCCGCACGGCGAAGTACACCGGCCTTGACCACGTCCCGTCCTGCAGCTTCGCGATCAACGCCACCTGGTTGAGTGTTGTCATGTTGGCGCTTCAATCTGATCGCCTGGACCCAGCACCTGCTCCTGCACGACGATCTCGCGAAGGCCGAGCCGAATACGCTGCTTGCCCGCTGCTGCACGTCGGCGACCGGCTCACCCGCGGACAGAGACGGCTCTGGCTACGGATCCAGCGCACCTGGCCGTGGGCGCAGGATCTCGCTGCGGCGTTCACCCGGCTCGCGGCGCTGCCTGTCCCGGCTGGTTGA
PROTEIN sequence
Length: 407
MGGHGGRARRRRDDDLRSRGAGGPGFAVRVRGADSTYWRLLDQLDTARLGSVAQARAGAREVVWAQRAELTGESFPPAPAGGRDLPGLVIDLDASVVVCHGEKECAAPTFKSRSGSIRCWRSAATPASSSPPRCAAGTRAATPPPTTSPSWQQRALLPDHHRHGTPILVRADPPGCTREFFAHIRIRRDESVSCEFSVGWQSEADRDRHGCEDGVDRRDRRRRRAPRRRRPGRDHPCASRPIADRLPPSGTRLIVRRERPHPAAQLDAFEERDGWRYTAFATDTRYGQLANLDARHRAHAGVEGRIRTAKYTGLDHVPSCSFAINATWLSVVMLALQSDRLDPAPAPARRSREGRAEYAACPLLHVGDRLTRGQRRLWLRIQRTWPWAQDLAAAFTRLAALPVPAG*