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SCNpilot_cont_1000_bf_scaffold_2141_1

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 41..1417

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 family n=1 Tax=Nocardioides sp. CF8 RepID=R7XXU3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 443.0
  • Bit_score: 547
  • Evalue 1.30e-152
  • rbh
Transposase {ECO:0000313|EMBL:EWT05861.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 446.0
  • Bit_score: 636
  • Evalue 3.80e-179
transposase similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 440.0
  • Bit_score: 295
  • Evalue 3.60e-77

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Taxonomy

Intrasporangium chromatireducens → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
ATGGGCAGAACCCGGCACCCCGGTGAAAAATCCAGGCTGACGGACTGGCTGCCCGAGGATCACCTGGCGTTCTTCGTGCATGACGCGGTGGAAGAGATCGATCTGTCGGCGTTCTATGCCGATTACCGCGCCGATGGGTGGGGTGGGGCGGCGCACGACCCGAAGCTGATGGTGGCGCTGCTGCTGTATGGCTACTGCGTGGGAGTCCGGTCGTCGCGGCAGATCGAACGGGCCTGTCATGTCGATGTGGCGTTTCGGGTGCTGGCGGCCAACCAGGCCCCGGACCACACCACGATCGCCCGCTTCCGGGCCCGCCACGAACACGCGTTGACGTCGCTGTTCACGGCGTCGCTGCGGTTGTGCGCGCGGGCCGCGATGACCACGGTCGGGCTGGTCGCGGTGGACGGCACGAAGATCGCCGCGGCGGCCTCGCTGCAGGCCAACCGGACCCGGGCCACGATCGAGGCCGAGGTGGAGAAGGTGTTCGCCGAGGCCAAGGCCCTCGACGAGGCCGAGGACGCCGAGTACGGCCCCGACCCAGGGCCTCGGCCCCCCGCCGCGTTGCGGGGTCGCGCTGATCGCCGACGGCGGTTCGCCCAGGCCAAGCAGCAACTCGACGAACAGCTCGCGGCCGAGCGTGCCGCGCATGAGGCGCACCTCGCGGCGCGGGCGGTGACCGAGAAGTTGCGCGGCAGGAAGCTGCGCGGCCGGAAACCGAAACCACCCGCGGAGAAGGCCGGTCACAAGGCGCCGAAGGCCAACACCAGCGACCCCGACAGCCGGATCATGGCGACCAAGCACGGGTTCGTGCAGGGCTACAACGCCCAAGCAGTGGCCAACACCGAGCAGGTCATCGTGGCCGCCACGGTCACCGACGAGCACAACGACCTGGCCCAGCTGCACCCGATGATCGCCGCCACCGCCGGGTCGCTGGCCGCAGCCGGGATCACCGAACGGCCCGAGAAGTTGCTGGCCGACGCCGGTTACGCCAGCGAAACCAACTTCGCCCAACTCGACGACGATGACCCTGACGCCTACGTCGCCACCCGCAATATGCGCCACAACCCGACCCCGCGCACCGGGCGTCGTGGTCCGCTCCGGGCGGGCGCCACGCTGGTCGAGAAGATGGACCGCAAGGTCTCGAACAAGGCGGGCCGGGCGCTCTACCGGCGCCGTCAGGCGATCATCGAGCCGGTCTTCGGTCAGATCAAACAAGCGCGCGGGATCCGACGGTTCCTGCGTCGAGGCCGGGCCGCTGCCGAGTCGGAATGGCAGCTGATCGCCGGCACCCACAACTTGTTGAAGCTCTACCGCCGCGCGCTCACCGACACCACGGTCGCCCCCTACAGCCGCCTGGCCACCACGGCCACCGGCTGA
PROTEIN sequence
Length: 459
MGRTRHPGEKSRLTDWLPEDHLAFFVHDAVEEIDLSAFYADYRADGWGGAAHDPKLMVALLLYGYCVGVRSSRQIERACHVDVAFRVLAANQAPDHTTIARFRARHEHALTSLFTASLRLCARAAMTTVGLVAVDGTKIAAAASLQANRTRATIEAEVEKVFAEAKALDEAEDAEYGPDPGPRPPAALRGRADRRRRFAQAKQQLDEQLAAERAAHEAHLAARAVTEKLRGRKLRGRKPKPPAEKAGHKAPKANTSDPDSRIMATKHGFVQGYNAQAVANTEQVIVAATVTDEHNDLAQLHPMIAATAGSLAAAGITERPEKLLADAGYASETNFAQLDDDDPDAYVATRNMRHNPTPRTGRRGPLRAGATLVEKMDRKVSNKAGRALYRRRQAIIEPVFGQIKQARGIRRFLRRGRAAAESEWQLIAGTHNLLKLYRRALTDTTVAPYSRLATTATG*