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SCNpilot_cont_1000_bf_scaffold_2011_7

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(8122..8652)

Top 3 Functional Annotations

Value Algorithm Source
pilus assembly protein TadE n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003628CA9 similarity UNIREF
DB: UNIREF100
  • Identity: 58.8
  • Coverage: 136.0
  • Bit_score: 151
  • Evalue 6.00e-34
Putative membrane protein {ECO:0000313|EMBL:EWC64536.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 127.0
  • Bit_score: 155
  • Evalue 7.70e-35
TadE family protein similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 133.0
  • Bit_score: 104
  • Evalue 4.50e-20

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGACCACCACAGTTCCCGCCCTGCCGGCGATGGCCCAGCCGCCGCCGATGGCCCAGCCGCCGCCGATGGCCTGGCCGCCGCCGATGGCGTGGCCAGGATGCGGACGCGGTGTGCGGCAACGGTTGCGGCGGATCCGGCAGGTGCTGGGCGAGGATCGGGGCTCGGCCACCGCGGAGCTGGCCGTCGCGACACCGCTGCTGTTGCTGATGGTGATGCTGATCGTGCAGTTCGCGTTGTGGTCGCACGCCTCGCACGTCGCCCAGGCTGCCGCCGCGCAAGGCCTCGATGCGGCGCGGCTCCCGGACGGCACCGGCGCGGACGGGACCAGGACGGCCACCTGGCTGATCAGCCAGCTCGCGGGCGGCCCCCTCACCCAGCCGCGCGTGGACACCAGCCGGGACGCCATCTCGGTCACCGTGACCGTGAGCGGAGCCGTCACCTCCGTCGTGCCGTTCCTCGTCCTACCAGTTCGTGCTACGGCGGTCGGGCCGGTCGAACGCTTCACCCCCGACGACCAGACACAGCCATGA
PROTEIN sequence
Length: 177
MTTTVPALPAMAQPPPMAQPPPMAWPPPMAWPGCGRGVRQRLRRIRQVLGEDRGSATAELAVATPLLLLMVMLIVQFALWSHASHVAQAAAAQGLDAARLPDGTGADGTRTATWLISQLAGGPLTQPRVDTSRDAISVTVTVSGAVTSVVPFLVLPVRATAVGPVERFTPDDQTQP*