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SCNpilot_cont_1000_bf_scaffold_2011_12

Organism: SCNPILOT_CONT_300_BF_Pseudonocardia_72_23

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(12330..12758)

Top 3 Functional Annotations

Value Algorithm Source
secretion system protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI000375172E similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 142.0
  • Bit_score: 205
  • Evalue 2.80e-50
Type II/IV secretion system protein TadC, associated with Flp pilus assembly {ECO:0000313|EMBL:EWC64534.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 142.0
  • Bit_score: 207
  • Evalue 1.00e-50
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 142.0
  • Bit_score: 155
  • Evalue 1.80e-35

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 429
GCCCTGTCCGCCTACCTGGACCTGGTGTGGATCACCCTGGCCGGGGGTGCCGGGGTGGACAGCGCGCTGGCCGGCGCGGTCCAGATCGGGCAGGGCTGGGCGTTCGACCGGCTCGCCGGGGCGCTGTCGACGGCCCAGCTGACGCGGGTGAATGCGTGGACGGCTCTGCGCCGCCTCGGTGAGGAGATCGCCGTGGACGAGCTCGCCGAGCTGGCCGGGTCGGTGAGCTTGGCCGGGACCGAGGGTGCGCGGGTGCGGGCCAGCCTCGCCGCCCGCGCCGGCTCGCTGCGGGCGCACCAGCTCACCGACGCCGAGGCCGCGGCCCAGTCGGCTACCGAGCGGATGTCGCTGCCGGTGATGCTGCTGTTCCTCGGCTTTCTGGTCTTCATCACCTACCCGGCGATCGGACAGATCCTCGCCGGCCTCTGA
PROTEIN sequence
Length: 143
ALSAYLDLVWITLAGGAGVDSALAGAVQIGQGWAFDRLAGALSTAQLTRVNAWTALRRLGEEIAVDELAELAGSVSLAGTEGARVRASLAARAGSLRAHQLTDAEAAAQSATERMSLPVMLLFLGFLVFITYPAIGQILAGL*