ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1609_5

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

partial RP 40 / 55 BSCG 40 / 51 MC: 1 ASCG 10 / 38
Location: comp(4278..5195)

Top 3 Functional Annotations

Value Algorithm Source
Glycine/betaine ABC transporter {ECO:0000313|EMBL:KHK98512.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 305.0
  • Bit_score: 414
  • Evalue 1.60e-112
periplasmic glycine betaine/choline-binding (LipO)protein of an ABC transporter; K05845 osmoprotectant transport system substrate-binding protein id=7721906 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 305.0
  • Bit_score: 392
  • Evalue 4.60e-106
  • rbh
periplasmic glycine betaine/choline-binding (LipO)protein of an ABC transporter; K05845 osmoprotectant transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 307.0
  • Bit_score: 347
  • Evalue 4.10e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGTTCACAGCAAAGAAGAGGGTCCTGGCCGTGGCTGCCGCGGCCGTCGGTGCCGCCCTCGCCCTCGCCGGCTGCTCATCGGGCAACCCGCTGAGTCCGACGAGCAGCGGCAGCAGTGGCGGGGGGAGCACCTCCACCATCACGGTCGGCTCGCAGGCGTATCCCTCGAACGAGATCATCGCCGAGATCTACGCGCAGGCGCTCGAGGGCGACGGCATCAAGGTCGAGCGCAAGTTCAACATCGGGCAGCGCGACGCCTACATGCCGTCCATCCAGAGCGGCGAGATCCAGCTCTTCCCGGAGTACACCGGCAACCTGCTGCAGTACTTCGACAAGACGGCCACCGCCACCACTCCGGACGACGTCTACGCCGCCCTGCAGAAGGCGCTGCCCGACAACCTGGCCGTGCTCGACCAGGCGACGGCCACCGACCAGGACTCCTACACGGTCACGAAGAAGTTCGCCGACAAGTGGAACCTCAAGACGATCGCCGACCTCGCCAACGTGAAGGTGCCGCTCACCGTGGGCGCGAACCGTGAGTTCGCTGGTCGCCCGTACGGCCCGGCCGGTCTCAAGTCGACGTACGGCATCACGGTGGAGTTCAAGCCGACCGGTGACACCACGGTCGATGAACTCGTCGCCGGGTCGATCAACATCGCCGACGTCTACACCTCGGACCCGCGCATCAAGACCGACGACCTCGTCGTGCTGCAGGACCCGAAGGGCCTGATCCTGGCGTCGAACGTCGTGCCGCTGGTCAGCAAGGACGTCAAGGACAAGATCGCCGACGTCATCAACGCCGTGCAGGCGAAGCTCACGCCGGAGGCGCTCGTCGACCTCAACCTGCAGAACACGAAGGACCAGAAGTCGCCGGAGGACCTCGCGAAGGCGTTCCTCTCCGACAACGGCCTCAAATAG
PROTEIN sequence
Length: 306
MFTAKKRVLAVAAAAVGAALALAGCSSGNPLSPTSSGSSGGGSTSTITVGSQAYPSNEIIAEIYAQALEGDGIKVERKFNIGQRDAYMPSIQSGEIQLFPEYTGNLLQYFDKTATATTPDDVYAALQKALPDNLAVLDQATATDQDSYTVTKKFADKWNLKTIADLANVKVPLTVGANREFAGRPYGPAGLKSTYGITVEFKPTGDTTVDELVAGSINIADVYTSDPRIKTDDLVVLQDPKGLILASNVVPLVSKDVKDKIADVINAVQAKLTPEALVDLNLQNTKDQKSPEDLAKAFLSDNGLK*