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SCNpilot_cont_1000_bf_scaffold_1272_6

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 10 / 38
Location: 6239..7405

Top 3 Functional Annotations

Value Algorithm Source
ABC-type antimicrobial peptide transport system,permease component n=1 Tax=Nitrosospira sp. APG3 RepID=M5DM84_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 85.3
  • Coverage: 388.0
  • Bit_score: 626
  • Evalue 1.80e-176
  • rbh
Multidrug ABC transporter permease {ECO:0000313|EMBL:KIO49392.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 388.0
  • Bit_score: 629
  • Evalue 3.00e-177
lipoprotein release ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 392.0
  • Bit_score: 508
  • Evalue 2.30e-141
  • rbh

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1167
ATGCCGATCCCGCTTTCCTATACGCTGCGCAATCTCGCGGCACGCAAATTGACGACGCTGCTTACGTCGGGCGGCATGGCGCTGGTGGTGTTCGTTTTCGCCACGGTATTAATGCTGGAGGAAGGCCTTCGAAAAACCCTGGTCGAAACCGGGTCCATGGACAATGCGGTTGTCACCCGGCGTTCCGCTGGCACTGAAGTACAGAGCGTCATCGACCGCGAGCAGGCTGCCATCGTCGAAAACCAGCCGGAAGTAGCAAATGGCATCGACGGTGCACGGCTCGCTTCAAAGGAAACCATCGTGCTGATTTCGCTGGTCAAACGTGATTCCGATAAAGCATCCAACGTGTTAATCCGGGGCGTGGGGCAAAAAGGCATCGAGCTTCGGCCTCAGGTCGGTATTGTCGAAGGGCGCATGTTTTCCCCCGGATCGGCAGAAATCATTGCCGGAAAAAGCATTGCGGAACGATATCATGGCGCGAGAGTTGGCGAGATATTACGTTTCGGGCAACGTGAATGGACCGTGGTGGGCATCATGGATGCGGGGAGAACAGGTTTCGATTCGGAAATCTGGGGCGATGCAGACCAACTGATGCAAGCCTTTCGCAGGCCGGTCTATTCTTCGGTGATAGTCAAGCTGAATGACGCGCGGGGATTCTCCGCATTCAAGAACCGCATCGAAGCCGATCCGCGCCTTACTCTGGAAGCCAAGCAGGAAAACGTCTTTTATGCCGAACAATCGAAAGTTCTGGCAAATTTCATTCGTTACCTGGGACTGATTCTCTCCATCATTTTTTCCATAGGTGCGATTATCGGCGCAATGATCACCATGTATGCGTCGGTCGCCCATCGTACTACCGAAATCGGCACCCTTCGAGCCCTGGGATTCCGCCGCGCCACCATTCTGCTGACTTTTTTGATAGAAGCGTTGATGCTGGGCGCAGCAGGAGGCGTGGTCGGGCTCATACTGGCTTCATTCATGCAGTTCTTCACCATCTCAACCATGAATTGGCAATCTTTCTCCGAGCTCGCATTCAGCTTCACGCTGAACGCCGCCATCATCGCAAAATCTTTGGCATTCGCCCTGATAATGGGAGTTGTCGGCGGCGTTCTTCCCGCTGCCCGTGCGGCGCGGCTGGATATCGTCGACTCGCTGCGAGCGGCATAA
PROTEIN sequence
Length: 389
MPIPLSYTLRNLAARKLTTLLTSGGMALVVFVFATVLMLEEGLRKTLVETGSMDNAVVTRRSAGTEVQSVIDREQAAIVENQPEVANGIDGARLASKETIVLISLVKRDSDKASNVLIRGVGQKGIELRPQVGIVEGRMFSPGSAEIIAGKSIAERYHGARVGEILRFGQREWTVVGIMDAGRTGFDSEIWGDADQLMQAFRRPVYSSVIVKLNDARGFSAFKNRIEADPRLTLEAKQENVFYAEQSKVLANFIRYLGLILSIIFSIGAIIGAMITMYASVAHRTTEIGTLRALGFRRATILLTFLIEALMLGAAGGVVGLILASFMQFFTISTMNWQSFSELAFSFTLNAAIIAKSLAFALIMGVVGGVLPAARAARLDIVDSLRAA*