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SCNpilot_cont_1000_bf_scaffold_2861_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: 2990..4963

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.1
  • Coverage: 671.0
  • Bit_score: 807
  • Evalue 1.80e-230
Exodeoxyribonuclease V subunit alpha n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 64.1
  • Coverage: 671.0
  • Bit_score: 807
  • Evalue 1.30e-230
recD; exodeoxyribonuclease V, alpha subunit similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 695.0
  • Bit_score: 609
  • Evalue 1.60e-171

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1974
ATGCGGCATGACATGCTCTCCTCGTTGCTCGACCACGCATTGCAACAGCAGCGCCTGCGCCCGCTGGACGTGGCCTTCGCGCGCTTCCTGATCGAACGGGAACCGAACATCGCACCCGCACTCGCCTGGCTGGCCGCGGTGCTCAGCCGGCAACTGGCCGACGGTCATCTCTGCCTCGACCTCGCCGGACTCGACGCGCTGGCCAACGAACAGGACTGGCCCGATGACTGGCGTGCACTGGCCGACACGCTGCGCGACGACCCGCCCGCGTCTTCGCTGCTCGCCGCCGGCGACGGTGGCGAACCGGCCAGTGCGCCGCTGGTCCTCGACGGCGGGCGACTCTACCTGCGCCGTTACTGGAACCACGAGCGCGAGGTGGCGAAGGGCATCCTGGACCGCGTGGCGCGCGCGGAACCGCCCTCGCCGTACCTGGCCGAGGAACTGGCGCGACTGTTCCCGACCGCTGCCGGCGACACACTCGACTGGCCGCGCATCGCCTGTGCGCTGGCCGCGCGCAGCGGCTTCGGCGTGATCACCGGTGGCCCCGGTACCGGCAAGACCACCACCGTGGTGCGCCTGCTCGGGCTGCTGCAGACCCTGCAATGGCGCGCACAGGCGCCGGCGCTGCGCATCCGCCTCGCCGCACCCACCGGCAAGGCGGCGGCGCGGCTCAATGCATCGATCAGCGCTCAGCTCGCCCGACTGGATGTGGACGACGCCGTGCGCGCCACCGTGCCCGCCGAGGTGGCCACCTTGCATCGCCTGCTGGGCGCCCGCCCCGATACCCGGCGCTTCCGCCACGACCGCACCAACCCGCTGCCGCTGGACGTACTCGTGATCGACGAGGCGTCGATGATTGACCTGGACATGATGGCCGCCGTGCTCGACGCGCTGCCCGCGTCGGCGCGGCTGATCCTGCTGGGCGACAAGGACCAGCTCGCCTCGGTGGAGGCCGGCGCGGTACTGGGCGACCTGTGCCGGCGTGCCGACGGTGGTCATTACGATGCCACCACCGCACGGTGGATCGCGGCCACCAGCGGCGACGACATCGGCGACTTCGTGCAGGCCGATGCACAGCCGCTGGATCAACACATCGCCATGCTGCGCGTGAGCCATCGCTTCAGCGCCGCCAGCGGCATCGGCCGGCTGGCACAGGACGTGAACATGGGTGATGCGGCCGCCACATTGGCGCTGCTGGGCGCACCTTGCGACGACCTCGCCTGGCTGCCCGCTGCCGACGTCGGCACGCTGCAAGCGCTCGTCATCCATGGCACCGCGGCGCCCGGCGGCGCCTGCGGCTACCGCCACTACCTCGATACCTTGCACTCCTGCCGCCCGGCCACCGACGCCGGTGACGACGCCCACGCGGACTGGGCCACCAGCGCCCTGCAGGCGTTCAATCGATTTCAGTTGCTGTGCGCGCTGCGCCACGGACCGCATGGTGTGGACAAGCTCAACCAGCTCGTCGCCGAAGCGCTGCACGCGCAGGGATTGATCGACGCCAGCAGCGGCTGGTACGAAGGTCGCCCGGTGATGGTCACCCGCAACGACTACGCGCTGGGCCTGATGAACGGCGACATCGGGCTGTGCCTGCGGCTGCCTGTCGCCGGTGGCGGCAGCCGGCTGGCGGTGGCCTTCCTCGCCGCGGCAGCAGGCGGCGGCACGCGCCTGCGCCTGGTCGCTCCCTCGCGCCTGCCCGAAGTGGAAACGGCCTACGCGCTCACCGTGCACAAATCACAAGGCTCCGAGTTCGAGCATGCCGCCCTGGTGCTGCCTGCAGCCATGAACCCGGTGCTGACCCGCGAACTGCTCTACACCGGCATCACCCGCGCCCGCCGCTGGTTCAGCCTGCTCGGCAGCGAAGCGATCATCGCTGACGCGGTGGCGCGCCGTACCCGCCGCCACTCCGGCCTGGCCGAGCGGTTGGCGCAGGATGGCGGCGATCGCGACGACCCCGCGCACCTCGCCGGCTGA
PROTEIN sequence
Length: 658
MRHDMLSSLLDHALQQQRLRPLDVAFARFLIEREPNIAPALAWLAAVLSRQLADGHLCLDLAGLDALANEQDWPDDWRALADTLRDDPPASSLLAAGDGGEPASAPLVLDGGRLYLRRYWNHEREVAKGILDRVARAEPPSPYLAEELARLFPTAAGDTLDWPRIACALAARSGFGVITGGPGTGKTTTVVRLLGLLQTLQWRAQAPALRIRLAAPTGKAAARLNASISAQLARLDVDDAVRATVPAEVATLHRLLGARPDTRRFRHDRTNPLPLDVLVIDEASMIDLDMMAAVLDALPASARLILLGDKDQLASVEAGAVLGDLCRRADGGHYDATTARWIAATSGDDIGDFVQADAQPLDQHIAMLRVSHRFSAASGIGRLAQDVNMGDAAATLALLGAPCDDLAWLPAADVGTLQALVIHGTAAPGGACGYRHYLDTLHSCRPATDAGDDAHADWATSALQAFNRFQLLCALRHGPHGVDKLNQLVAEALHAQGLIDASSGWYEGRPVMVTRNDYALGLMNGDIGLCLRLPVAGGGSRLAVAFLAAAAGGGTRLRLVAPSRLPEVETAYALTVHKSQGSEFEHAALVLPAAMNPVLTRELLYTGITRARRWFSLLGSEAIIADAVARRTRRHSGLAERLAQDGGDRDDPAHLAG*