ggKbase home page

SCNpilot_cont_1000_bf_scaffold_3018_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(2026..3195)

Top 3 Functional Annotations

Value Algorithm Source
Membrane-bound lytic murein transglycosylase D n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJX4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 393.0
  • Bit_score: 404
  • Evalue 8.70e-110
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:EIL87515.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 393.0
  • Bit_score: 404
  • Evalue 1.20e-109
LysM repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 332.0
  • Bit_score: 388
  • Evalue 2.70e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAACCGGACGCCCCGACACCTGCTGCTGCCGCTGGCGCTGTCGACAGCGCTGGCCGCCTGCAGCAACATGCCTTCGCAACCGGCACGCGCACCTGTCGCCGTCGTCGCCCCCGCCAGCACGCCACCGGCGGTTGCCGCCAGTGTCGCGACTGCGGCACCTGTACCGGCGGCCGACCTGTGGGATCGACTGCGCAGCAGTTTTGTCATGCCGGATTGCAATGCCGACCCCGCGGTGCTGGCGTGGGCCGGGCGCTACACGCGCAGCCCGGCGCGGTTCGAGGACACCTTGCGCGAGGCGATGCCGCGCCTGGCCTATGTCCAGCAGGTCGCCGAGCAATACGACGTGCCCGGCGAGTTCGCACTGCTGCCGTGGGTGGAGAGCCGTTACCGCCCGGTGCAGGGACGCAGGCACCATGCTGCCGGCATGTGGCAGATCATGCCGGTGACCGCCCGCTCGATGGGCCTGCGCGTGGATCGCCATTACGACGGCCGGCTGGACATACCGGCCGCAGCGCACGCCGTGATGAAGTTGCTGCGGCAATACCACGACCGCTTCCACGACTGGCGCGTGGCCGACTATGCGTACAACGCCGGCGAGTTCAAGATACGCGGGTTGATCAGCCGCCACGGCATGCCGGCGGACAAGCCGGCGATCCCCGACCTGCCGGTACGCCGCGTCACTCGCGAGCACCTGACCCAGTTGCTGGCGATCGCATGCGTGATACGCGAGCCGTCGCGCTTCCAGGTCAGCCTGCCCAGCCTGCCGGAGTCCGAGCACCTGGTGCAGGCACCGGTGACGCATCCCGTCACGGTGGCGCGCGCCGCCGAAATGGCCGGCATGCCGGAATCGGCCCTGCGTCATCTCAATGCGGCATTCCGCGGCAACAAGCTGGATGGGCGAACGGTTTCGCATCTCATGCTGCCGGCCGGTCACGCCGGTCGGTTCGAGCTCGCCATGCTCGATGCCGCCGCGGCCTCCACCACCACCGCAGCAGACGACGAATCGTCCCGCGGTCCTGACACGCACGTGGTCAGCCCCGGTGAAAGCCTGTGGCAGATTGCGCGCGAGTATTCGACCAGCGTCGCGCATCTGCAGCAACTGAACGACCTGGCCCAGGGCCAGGCGATCCAGCCGGGACAGGTGCTGAAGCTGGGCGACGTCGACTGA
PROTEIN sequence
Length: 390
MNRTPRHLLLPLALSTALAACSNMPSQPARAPVAVVAPASTPPAVAASVATAAPVPAADLWDRLRSSFVMPDCNADPAVLAWAGRYTRSPARFEDTLREAMPRLAYVQQVAEQYDVPGEFALLPWVESRYRPVQGRRHHAAGMWQIMPVTARSMGLRVDRHYDGRLDIPAAAHAVMKLLRQYHDRFHDWRVADYAYNAGEFKIRGLISRHGMPADKPAIPDLPVRRVTREHLTQLLAIACVIREPSRFQVSLPSLPESEHLVQAPVTHPVTVARAAEMAGMPESALRHLNAAFRGNKLDGRTVSHLMLPAGHAGRFELAMLDAAAASTTTAADDESSRGPDTHVVSPGESLWQIAREYSTSVAHLQQLNDLAQGQAIQPGQVLKLGDVD*