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SCNpilot_cont_1000_bf_scaffold_11445_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: 2040..2570

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein UU7_09515 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W174_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 176.0
  • Bit_score: 316
  • Evalue 1.40e-83
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 176.0
  • Bit_score: 316
  • Evalue 2.00e-83
putative Ku domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 172.0
  • Bit_score: 277
  • Evalue 3.90e-72

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGGCACGACCCATCTGGAGCGGAACCCTGTCGTTCGGCCTGCTCAACGTGCCGGTGTCGCTGATGACCGGCGAGCGCAGCGTGGACCTGCATTTCCGCATGCTGGACAGCCGCAGCAACACGCCGGTCCGGTACGAGCGCGTGAACGCCGAGACCGGGGAGGAGGTGCCTTGGAAGGAGATCGTCAAGGCGTTCGAATACGCCAAGGGCAACTACGTCGTGCTGGAGCCGGAGGACATCAAGTCGGCCGCCGCCGAGGGGCGCGAGGCGGTCGACGTGAAAGCCTTCGTCGAGGCCGACTCGATCGGCCCGGAATACTTCGAGAAGCCGTACTACCTGGTGCCAGGCAAGAAGGCGGAGAAGGGTTACGTGCTGCTGCGCGAGGTGCTCAAGCGCACCGGCCGCATCGGCATCGCGCGGGTGGTGATCCGCACGCGCGAATACCTCTCCGCAGTGGTGCCGCGGGGGGATGCGCTGATGCTGATGCTGATGCGCTACCCACAGGAGCTGGTAAGTCGAAAGGCGTGGTGA
PROTEIN sequence
Length: 177
MARPIWSGTLSFGLLNVPVSLMTGERSVDLHFRMLDSRSNTPVRYERVNAETGEEVPWKEIVKAFEYAKGNYVVLEPEDIKSAAAEGREAVDVKAFVEADSIGPEYFEKPYYLVPGKKAEKGYVLLREVLKRTGRIGIARVVIRTREYLSAVVPRGDALMLMLMRYPQELVSRKAW*