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SCNpilot_cont_1000_bf_scaffold_11445_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(3072..3440)

Top 3 Functional Annotations

Value Algorithm Source
GAF sensor hybrid histidine kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W180_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 117.0
  • Bit_score: 156
  • Evalue 1.70e-35
GAF sensor hybrid histidine kinase {ECO:0000313|EMBL:EIL93221.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.2
  • Coverage: 117.0
  • Bit_score: 156
  • Evalue 2.40e-35
response regulator similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 109.0
  • Bit_score: 71
  • Evalue 1.70e-10

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
ATGTTTCCCAAACGGGTGCTGCTGGTGGAGGACGACCCCGATACCCGCGAGATCACCGCACTGCTGCTGCAGCACGCAGGCTACACGGTGATCGTGGCGCACGACATCGCCAGCGGCGTGGCGGAGTCGGAAGCACGGCAGGATTTCGGCGTGATCGTGACGGACATGTATCTGGGCCGCGGCCAGACCGGCATCTCGCTGATTCGCAGCCTGCGGGACAGCGGCTCGCGCACCCCGATCGTGCTCACCTCCGCGCACGAGGAAGCATCCATCGCCGCCCGCGACATGAAGGTGCTGTTCCTGCCCAAGCCGTACGGCCGGCAGGCCCTGCTGTCGGTGGTGGCCATGGCGCGCGTGTGTGGCGTCTGA
PROTEIN sequence
Length: 123
MFPKRVLLVEDDPDTREITALLLQHAGYTVIVAHDIASGVAESEARQDFGVIVTDMYLGRGQTGISLIRSLRDSGSRTPIVLTSAHEEASIAARDMKVLFLPKPYGRQALLSVVAMARVCGV*