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SCNpilot_cont_1000_bf_scaffold_11445_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

partial RP 12 / 55 BSCG 19 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: comp(3531..4685)

Top 3 Functional Annotations

Value Algorithm Source
Small-conductance mechanosensitive ion channel n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6E3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 356.0
  • Bit_score: 514
  • Evalue 1.00e-142
mechanosensitive ion channel protein MscS similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 355.0
  • Bit_score: 368
  • Evalue 2.80e-99
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 370.0
  • Bit_score: 542
  • Evalue 4.80e-151

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Taxonomy

RIFOXYA1_FULL_Xanthomonadales_68_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1155
ATGGCCGATATCTTCACCGTGTGGTGGCAGTTGTGGCAGCAGCATGTCGCGGTGCGGCTGGGCGTGACCGTGGTGGCCGGTTTGTTGCTGGCGCTGGTGCTGCGTGTCGCGATCCACGCCGTGCTGCGGCGGCTCGCGGGCGATCGCCCGGTGATCGCCGACCTGATGCAGCGCGCCCACGCGCCGCTGCAGTGGCTGCTGCCCTTGCTCTCGCTTTTGCTGGTGCTGCGCTATGGCCCCGCACTGGACTCGGCACCGATGGCACTGGTCGAGCATCTGTTGCTGATCGGTTTGCTGGCTGCCGGCACCTGGCTGGTGGTGCGTTGCGTCGGCGCGTTCGAGGGCGCCGCGGTGCGGCGCTATCCGATGGATGCCGCGGACAACCTGCAGGCTCGTCGGGTGGTCACCCAGGTGCGCGTGCTGGCGCGCACTGCCGACGTGGTGGTGATCGTGCTGGGCACGGCGATCATCCTGCTCACCATTCCCGGCGTGCGCCAGCTCGGCGCCAGCCTGCTCGCCTCCGCCGGCGTGGCCGGGCTGGCGATAGGACTGGCGGCGCGGCCGGTGCTGAGCAACCTTATCGCCGGCCTGCAGATTGCGCTGACCCAGCCCATCCGTCTCGACGACGTGGTGATCATCGAAGGCGAATGGGGCCGCATCGAGGAGATCGCCGGAAGTTACGTGGTGGTGCGCATCTGGGACGAGCGCCGGCTGGTGGTGCCGCTCAACTGGTTCATCGAGCATCCATTCCAGAACTGGACGCGCCGCAGTTCGCAGCTGATCGGCACGGTGTTCCTGATGCTGGATTTCCGCACGCCACTGGCGCCGCTGCGCGAGGAGTTCAAGCGCCTGTGCGAGGCCTCGGAGCAGTGGGATCGTCGCGTATGCGTGCTGCAGGTCACCGACGCCACCGAGCAGACGATGCAACTGCGCATGCTGGTGAGCTCCACCGATTCGGGCCGCAACTTCGACCTGCGTTGCCAGGTGCGCGAGGGACTGATCGCCTTCGTTCAGGCGCACTACCCGCACGCGCTGCCACGCTGGCGCTGCGAACTGGATCGTGGCCAAGAATCCGCCGCGCCGATGCCGCCGGCGCCGGCACCGCAGCGCGCGCCGTCGGCCGAAGACGGCGGCCCCGAGCGTCGCGCCAGCTGA
PROTEIN sequence
Length: 385
MADIFTVWWQLWQQHVAVRLGVTVVAGLLLALVLRVAIHAVLRRLAGDRPVIADLMQRAHAPLQWLLPLLSLLLVLRYGPALDSAPMALVEHLLLIGLLAAGTWLVVRCVGAFEGAAVRRYPMDAADNLQARRVVTQVRVLARTADVVVIVLGTAIILLTIPGVRQLGASLLASAGVAGLAIGLAARPVLSNLIAGLQIALTQPIRLDDVVIIEGEWGRIEEIAGSYVVVRIWDERRLVVPLNWFIEHPFQNWTRRSSQLIGTVFLMLDFRTPLAPLREEFKRLCEASEQWDRRVCVLQVTDATEQTMQLRMLVSSTDSGRNFDLRCQVREGLIAFVQAHYPHALPRWRCELDRGQESAAPMPPAPAPQRAPSAEDGGPERRAS*