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SCNpilot_cont_1000_p_scaffold_31_13

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(11273..13015)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type anion transport system, duplicated permease component protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IY99_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 586.0
  • Bit_score: 921
  • Evalue 5.40e-265
  • rbh
anion ABC transporter permease; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 586.0
  • Bit_score: 921
  • Evalue 1.70e-265
  • rbh
ABC-type anion transport system, duplicated permease component protein {ECO:0000313|EMBL:ADJ62059.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 586.0
  • Bit_score: 921
  • Evalue 7.60e-265

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Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGAAAAGTACCGCCCCTCAGCTTGCCATTGTTGAAGAGCGGCGCACGCTCGGCTGGATCGACGCCCTGTTCCTCCTGGTGCTGCTGGGCCTCTTGTGGAGCGCGCTGCATTTCGGCAAGGGCATGATCGTGCACTTCGATCCGGCGGCGGTGCCCGAGATCGACAGCTCGCCCAGCCAGATCCCCTATTACGCGGGCCGCACCCTGATGCGCATGTGGATCGCGTTCGGCTTCTCGCTGTTCTTCGCCGTGGCCACCGGCTACCTTGCGGCCAAGAGCCGGACGGCGCGCGCTTTCATCCTGCCGGCCCTCGATGTGCTGCAGTCGGTGCCGGTGCTGGGCTTCCTGTCCGCGACCGTGGCGGCCTTCATGGCGCTGTTCCCTGGCAGCCTGCTCGGCGTCGAGTGCGCTGCGATCTTCGCCATTTTCACGGGGCAGGTCTGGAACATGGCCTTCGGGTTCTATCACTCGATGGTGACCATTCCCAACGACATGCAGGAGGCGGCCTCGACATACGGCCTGACGCGCGCGCAGCGCTTTCGCACCGTGGAGCTGCCGGCTTCGGCCCACAGCCTGATATGGAACTCCATGATGTCCTTCGGCGGCGGCTGGTTCTTCGTCGCGCAGAGCGAGGCCATCAGCGTGATGAACAAGGACATCAAGCTTCCGGGCCTGGGCTCCTACATGGCGCAGGCCATCGCGCAGGGCGACAACACGGCCGCGCTGTGGGCGGTGGTGGCCATGATCGTGCTGATCCTCGTCAGCGACCAGCTGGTCTGGCGTCCGTTGCTGGCGTGGGCCGACAAGTTCAAGATCGAGCTGACCGAGTCGGCGACGCCGGCAACTTCGTGGGTCTACAACCTGCTGCGCGGCGCCTACCTGTTCACCTGGATCGGCGAGCGCCTCTGGCTGCCCCTGAAGGACCGGGTGGCGCGGGTTCCCAATCCGGCCGCAAAGGTTCCGGTGCGGCTCACGGTCGGCGGCCAGAAGCTGCTTTGGCGCGCTGCGGGCATCGTGCTCGCCGTCTGGATCGGCTTCGAGATCCTGAAGGCTCTGGCGGCCGCCGTGGCGGCGCTGCACGGCGCTTTGACGCTGGCCGGCTTCGGCCACATCGTCTGGCTCGGCGTGCTGACGGCCTTGCGTGTCGCCACCATGACGGTGCTGGCCACGCTGATCTGGGTGCCGGTCGGCGTGTGGATCGGTTCGCAGCCGCGTGTGGCGCGGTTCGCCCAGCCGCTGGCCCAGATCGGCGCGTCGTTCCCGGTGAACATGACGTTCCCGATCGTCGTCGGCTTCTTCGTCGCCACCCATGTCACGCTCAACTGGGGCAGCATCCTGCTCATCGCGATGGGCACGCAGTGGTACATCCTGTTCAACGTGATCGCGGGCGCCATGGCCATCCCCAACGACCTCAAGGAAGCGGCGCGGGTCTACGGCTTGCGCGACTGGAACCTGTGGCGCACGCTGATCCTGCCGGCGATCTTTCCGTACTGGGTCACCGGCGCCTGCACGGCCGCCGGTGGCGCATGGAACGCCAGCATCGTGGCCGAGCTCGCCACCTGGGGCAGCACGACCCTGAAGGCGGACGGCCTGGGGGCATACATCGCGACCGTCACACGGGAAGGGGACACGGCGCTGATCATCGCAAGCATCGGCGTGATGTCGATCTTCGTCGTCCTGATGAACAAGCTCATCTGGCGCCGTCTCTATGCCTTTGCAGAGCGCCGATTCAAGCTGGATTGA
PROTEIN sequence
Length: 581
MKSTAPQLAIVEERRTLGWIDALFLLVLLGLLWSALHFGKGMIVHFDPAAVPEIDSSPSQIPYYAGRTLMRMWIAFGFSLFFAVATGYLAAKSRTARAFILPALDVLQSVPVLGFLSATVAAFMALFPGSLLGVECAAIFAIFTGQVWNMAFGFYHSMVTIPNDMQEAASTYGLTRAQRFRTVELPASAHSLIWNSMMSFGGGWFFVAQSEAISVMNKDIKLPGLGSYMAQAIAQGDNTAALWAVVAMIVLILVSDQLVWRPLLAWADKFKIELTESATPATSWVYNLLRGAYLFTWIGERLWLPLKDRVARVPNPAAKVPVRLTVGGQKLLWRAAGIVLAVWIGFEILKALAAAVAALHGALTLAGFGHIVWLGVLTALRVATMTVLATLIWVPVGVWIGSQPRVARFAQPLAQIGASFPVNMTFPIVVGFFVATHVTLNWGSILLIAMGTQWYILFNVIAGAMAIPNDLKEAARVYGLRDWNLWRTLILPAIFPYWVTGACTAAGGAWNASIVAELATWGSTTLKADGLGAYIATVTREGDTALIIASIGVMSIFVVLMNKLIWRRLYAFAERRFKLD*